Protein Family : RNAligase 123748568

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  42
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42 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30111.t000012 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA R. communis v0.1 18157   30111: 81539-99695
30111.t000028 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA R. communis v0.1 20396   30111: 195778-216173
orange1.1g046016m.g (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA C. sinensis v1.1 19875   scaffold00014: 1298902-1318776
AT1G07910 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase A. thaliana TAIR10 RNL 9176   Chr1: 2445470-2454645
Thhalv10006605m.g (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase E. salsugineum v1.0 8788   scaffold_5: 13136002-13144789
Ciclev10027702m.g (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase C. clementina v1.0 20573   scaffold_8: 22380131-22400703
Lus10037788.g (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA L. usitatissimum v1.0 9067   scaffold196: 1579598-1588664
Lus10017071.g (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA L. usitatissimum v1.0 9062   scaffold216: 59156-68217
Gorai.009G078900 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA G. raimondii v2.1 15933   Chr09: 5692389-5708321
Thecc1EG041088 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA T. cacao v1.1 19899   scaffold_9: 35398947-35418845
Migut.D02182 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA M. guttatus v2.0 13444   scaffold_4: 18428608-18442051
Migut.N02091 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA M. guttatus v2.0 11456   scaffold_14: 18444914-18456369
Cagra.1671s0411 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA C. grandiflora v1.1 11828   Scaffold1671: 1474841-1486668
Glyma.U020600 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA G. max Wm82.a2.v1 22864   scaffold_21: 3353318-3376181
Brara.I05332 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase B. rapa FPsc v1.3 7206   A09: 43395120-43402325
Bostr.25219s0155 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase B. stricta v1.2 8413   Scaffold25219: 761601-770013
Medtr4g060795 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA M. truncatula Mt4.0v1 19721   chr4: 22371212-22390932
SapurV1A.0837s0040 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA S. purpurea v1.0 25352   Scaffold0837: 29557-54908
Eucgr.B02467 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase E. grandis v2.0 21559   Chr02: 44739812-44761370
Prupe.6G094700 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA P. persica v2.1 16511   Pp06: 6576858-6593368
Manes.11G141000 (1 of 1) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase M. esculenta v6.1 20487   Chromosome11: 25356586-25377072
Kalax.0055s0132 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA K. laxiflora v1.1 11146   scaffold_55: 955632-966777
Kalax.0817s0016 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA K. laxiflora v1.1 11230   scaffold_817: 119717-130946
Kaladp0098s0158 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA K. fedtschenkoi v1.1 11280   Scaffold_98: 1366201-1377480
AL6G53580 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase A. lyrata v2.1 8377   scaffold_6: 25102511-25110887
AL1G18200 (1 of 2) 3.1.4.37 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase / Cyclic-CMP phosphodiesterase A. lyrata v2.1 8655   scaffold_1: 2921432-2930086
Tp57577_TGAC_v2_gene14912 (1 of 5) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA T. pratense v2 19838   Tp57577_TGAC_v2_LG7: 17014553-17034390
DCAR_006042 (1 of 1) PF08302 - Fungal tRNA ligase phosphodiesterase domain (tRNA_lig_CPD) D. carota v2.0 22545   DCARv2_Chr2: 21157630-21180174
Solyc11g072420.1 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA S. lycopersicum ITAG2.4 24344   SL2.50ch11: 55584398-55608741
AUR62006513 (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA C. quinoa v1.0 37557   C_Quinoa_Scaffold_3429: 1776536-1814092

42 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30111.m000725 R. communis v0.1 123748568 RNAligase 2 5271 Pentapetalae
Lus10037788 L. usitatissimum v1.0 123748568 RNAligase 2 5271 Pentapetalae
Lus10017071 L. usitatissimum v1.0 123748568 RNAligase 2 5271 Pentapetalae
Migut.D02182.1.p M. guttatus v2.0 123748568 RNAligase 2 5271 Pentapetalae
Glyma.U020600.1.p G. max Wm82.a2.v1 123748568 RNAligase 1 5271 Pentapetalae
Medtr4g060795.1 M. truncatula Mt4.0v1 123748568 RNAligase 1 5271 Pentapetalae
Eucgr.B02467.1.p E. grandis v2.0 123748568 RNAligase 1 5271 Pentapetalae
Kalax.0817s0016.1.p K. laxiflora v1.1 123748568 RNAligase 2 5271 Pentapetalae
Kalax.0055s0132.1.p K. laxiflora v1.1 123748568 RNAligase 2 5271 Pentapetalae
Kaladp0098s0158.1.p K. fedtschenkoi v1.1 123748568 RNAligase 1 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA15409 T. pratense v2 123748568 RNAligase 1 5271 Pentapetalae
DCAR_006042 D. carota v2.0 123748568 RNAligase 1 5271 Pentapetalae
AUR62006513-RA C. quinoa v1.0 123748568 RNAligase 2 5271 Pentapetalae
AUR62025015-RA C. quinoa v1.0 123748568 RNAligase 2 5271 Pentapetalae
Phvul.011G072500.1.p P. vulgaris v2.1 123748568 RNAligase 1 5271 Pentapetalae
Potri.016G083100.6.p P. trichocarpa v3.1 123748568 RNAligase 1 5271 Pentapetalae
Podel.16G086600.1.p P. deltoides WV94 v2.1 123748568 RNAligase 1 5271 Pentapetalae
VIT_206s0004g03300.1 V. vinifera v2.1 123748568 RNAligase 1 5271 Pentapetalae
Lsat_1_v5_gn_6_26241.1 L. sativa V8 123748568 RNAligase 1 5271 Pentapetalae
Carub.0001s0725.1.p C. rubella v1.1 123748568 RNAligase 2 5271 Pentapetalae
MD11G1129800 M. domestica v1.1 123748568 RNAligase 1 5271 Pentapetalae
HanXRQChr13g0401461 H. annuus r1.2 123748568 RNAligase 1 5271 Pentapetalae
gene32598-v1.0-hybrid.t1 F. vesca v2.0.a2 123748568 RNAligase 1 5271 Pentapetalae
30111.m000709 R. communis v0.1 123748568 RNAligase 2 5271 Pentapetalae
orange1.1g046016m C. sinensis v1.1 123748568 RNAligase 1 5271 Pentapetalae
AT1G07910.1 A. thaliana TAIR10 123748568 RNAligase 1 5271 Pentapetalae
Thhalv10006605m E. salsugineum v1.0 123748568 RNAligase 1 5271 Pentapetalae
Ciclev10027702m C. clementina v1.0 123748568 RNAligase 1 5271 Pentapetalae
Gorai.009G078900.1 G. raimondii v2.1 123748568 RNAligase 1 5271 Pentapetalae
Thecc1EG041088t1 T. cacao v1.1 123748568 RNAligase 1 5271 Pentapetalae