Gene : Medtr4g060795 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Description:  RNA ligase, putative
Genomic Order:  2663 Name:  ? Medtr4g060795
Secondary Identifier:  ? PAC:31114052
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g060795 0.5kb upstream 0.5kb upstream 20221 true chr4: 22371212-22391432 Medicago truncatula
Medtr4g060795 0.5kb upstream 0.5kb upstream 500 false chr4: 22390933-22391432 Medicago truncatula
Medtr4g060795 0.5kb downstream 0.5kb downstream 20221 true chr4: 22370712-22390932 Medicago truncatula
Medtr4g060795 0.5kb downstream 0.5kb downstream 500 false chr4: 22370712-22371211 Medicago truncatula
Medtr4g060795 1.0kb upstream 1.0kb upstream 20721 true chr4: 22371212-22391932 Medicago truncatula
Medtr4g060795 1.0kb upstream 1.0kb upstream 1000 false chr4: 22390933-22391932 Medicago truncatula
Medtr4g060795 1.0kb downstream 1.0kb downstream 20721 true chr4: 22370212-22390932 Medicago truncatula
Medtr4g060795 1.0kb downstream 1.0kb downstream 1000 false chr4: 22370212-22371211 Medicago truncatula
Medtr4g060795 2.0kb upstream 2.0kb upstream 21721 true chr4: 22371212-22392932 Medicago truncatula
Medtr4g060795 2.0kb upstream 2.0kb upstream 2000 false chr4: 22390933-22392932 Medicago truncatula
Medtr4g060795 2.0kb downstream 2.0kb downstream 21721 true chr4: 22369212-22390932 Medicago truncatula
Medtr4g060795 2.0kb downstream 2.0kb downstream 2000 false chr4: 22369212-22371211 Medicago truncatula
Medtr4g060795 5.0kb upstream 5.0kb upstream 24721 true chr4: 22371212-22395932 Medicago truncatula
Medtr4g060795 5.0kb upstream 5.0kb upstream 5000 false chr4: 22390933-22395932 Medicago truncatula
Medtr4g060795 5.0kb downstream 5.0kb downstream 24721 true chr4: 22366212-22390932 Medicago truncatula
Medtr4g060795 5.0kb downstream 5.0kb downstream 5000 false chr4: 22366212-22371211 Medicago truncatula
Medtr4g060795 10.0kb upstream 10.0kb upstream 29721 true chr4: 22371212-22400932 Medicago truncatula
Medtr4g060795 10.0kb upstream 10.0kb upstream 10000 false chr4: 22390933-22400932 Medicago truncatula
Medtr4g060795 10.0kb downstream 10.0kb downstream 29721 true chr4: 22361212-22390932 Medicago truncatula
Medtr4g060795 10.0kb downstream 10.0kb downstream 10000 false chr4: 22361212-22371211 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306506 5265 Fabidae View MSA
124065775 5270 Rosid View MSA
123748568 5271 Pentapetalae View MSA
122793340 5272 Eudicot View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.596     High High
cufflinks 1.188        
cufflinks 0.496       Low
cufflinks 0.754        
cufflinks 1.039        
cufflinks 0.822        
cufflinks 3.257        
cufflinks 0.98        
cufflinks 3.041        

0 Strain