Gene : Glyma.U020600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Genomic Order:  115
Name:  ? Glyma.U020600 Secondary Identifier:  ? PAC:30535387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U020600 0.5kb upstream 0.5kb upstream 23364 true scaffold_21: 3353318-3376681 Glycine max
Glyma.U020600 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3376182-3376681 Glycine max
Glyma.U020600 0.5kb downstream 0.5kb downstream 23364 true scaffold_21: 3352818-3376181 Glycine max
Glyma.U020600 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3352818-3353317 Glycine max
Glyma.U020600 1.0kb upstream 1.0kb upstream 23864 true scaffold_21: 3353318-3377181 Glycine max
Glyma.U020600 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3376182-3377181 Glycine max
Glyma.U020600 1.0kb downstream 1.0kb downstream 23864 true scaffold_21: 3352318-3376181 Glycine max
Glyma.U020600 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3352318-3353317 Glycine max
Glyma.U020600 2.0kb upstream 2.0kb upstream 24864 true scaffold_21: 3353318-3378181 Glycine max
Glyma.U020600 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3376182-3378181 Glycine max
Glyma.U020600 2.0kb downstream 2.0kb downstream 24864 true scaffold_21: 3351318-3376181 Glycine max
Glyma.U020600 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3351318-3353317 Glycine max
Glyma.U020600 5.0kb upstream 5.0kb upstream 27864 true scaffold_21: 3353318-3381181 Glycine max
Glyma.U020600 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3376182-3381181 Glycine max
Glyma.U020600 5.0kb downstream 5.0kb downstream 27864 true scaffold_21: 3348318-3376181 Glycine max
Glyma.U020600 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3348318-3353317 Glycine max
Glyma.U020600 10.0kb upstream 10.0kb upstream 32864 true scaffold_21: 3353318-3386181 Glycine max
Glyma.U020600 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3376182-3386181 Glycine max
Glyma.U020600 10.0kb downstream 10.0kb downstream 32864 true scaffold_21: 3343318-3376181 Glycine max
Glyma.U020600 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3343318-3353317 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306506 5265 Fabidae View MSA
124065775 5270 Rosid View MSA
123748568 5271 Pentapetalae View MSA
122793340 5272 Eudicot View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.12512 0.0 18.3877    
cufflinks 5.61712 0.0 16.9213    
cufflinks 4.50365 0.0 16.2198    
cufflinks 6.76649 0.0 20.0752    
cufflinks 6.37425 0.0 18.963    
cufflinks 3.68578 0.0 11.8259   Low
cufflinks 13.7464 0.0 51.1753   High
cufflinks 3.57384 0.0 13.4855   Low
cufflinks 4.61766 0.0 14.0944    
cufflinks 0.344        
cufflinks 0.187       Low
cufflinks 0.59       High
cufflinks 0.593       High
cufflinks 0.744       High
cufflinks 0.355        
cufflinks 0.31        
cufflinks 0.319        
cufflinks 0.611       High
cufflinks 0.704       High
cufflinks 0.278        
cufflinks 0.248        
cufflinks 0.304        
cufflinks 0.331        
cufflinks 0.206       Low
cufflinks 0.291        
cufflinks 0.284        

0 Strain