Gene : Solyc11g072420.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Description:  RNA ligase isoform 2 (Fragment) (AHRD V1 **-* Q0WZC1_WHEAT)
Genomic Order:  2296 Name:  ? Solyc11g072420.1
Secondary Identifier:  ? PAC:36151631
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g072420.1 0.5kb upstream 0.5kb upstream 24844 true SL2.50ch11: 55584398-55609241 Solanum lycopersicum
Solyc11g072420.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 55608742-55609241 Solanum lycopersicum
Solyc11g072420.1 0.5kb downstream 0.5kb downstream 24844 true SL2.50ch11: 55583898-55608741 Solanum lycopersicum
Solyc11g072420.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 55583898-55584397 Solanum lycopersicum
Solyc11g072420.1 1.0kb upstream 1.0kb upstream 25344 true SL2.50ch11: 55584398-55609741 Solanum lycopersicum
Solyc11g072420.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 55608742-55609741 Solanum lycopersicum
Solyc11g072420.1 1.0kb downstream 1.0kb downstream 25344 true SL2.50ch11: 55583398-55608741 Solanum lycopersicum
Solyc11g072420.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 55583398-55584397 Solanum lycopersicum
Solyc11g072420.1 2.0kb upstream 2.0kb upstream 26344 true SL2.50ch11: 55584398-55610741 Solanum lycopersicum
Solyc11g072420.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 55608742-55610741 Solanum lycopersicum
Solyc11g072420.1 2.0kb downstream 2.0kb downstream 26344 true SL2.50ch11: 55582398-55608741 Solanum lycopersicum
Solyc11g072420.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 55582398-55584397 Solanum lycopersicum
Solyc11g072420.1 5.0kb upstream 5.0kb upstream 29344 true SL2.50ch11: 55584398-55613741 Solanum lycopersicum
Solyc11g072420.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 55608742-55613741 Solanum lycopersicum
Solyc11g072420.1 5.0kb downstream 5.0kb downstream 29344 true SL2.50ch11: 55579398-55608741 Solanum lycopersicum
Solyc11g072420.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 55579398-55584397 Solanum lycopersicum
Solyc11g072420.1 10.0kb upstream 10.0kb upstream 34344 true SL2.50ch11: 55584398-55618741 Solanum lycopersicum
Solyc11g072420.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 55608742-55618741 Solanum lycopersicum
Solyc11g072420.1 10.0kb downstream 10.0kb downstream 34344 true SL2.50ch11: 55574398-55608741 Solanum lycopersicum
Solyc11g072420.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 55574398-55584397 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469305 5263 Asterids View MSA
123748568 5271 Pentapetalae View MSA
122793340 5272 Eudicot View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain