Gene : Podel.16G086600 P. deltoides WV94 v2.1
Defline:  (1 of 1) PF08302 - Fungal tRNA ligase phosphodiesterase domain (tRNA_lig_CPD) Genomic Order:  866
Name:  ? Podel.16G086600 Secondary Identifier:  ? PAC:37301063
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.16G086600 0.5kb upstream 0.5kb upstream 18796 true Chr16: 6693873-6712668 Populus deltoides WV94
Podel.16G086600 0.5kb upstream 0.5kb upstream 500 false Chr16: 6712169-6712668 Populus deltoides WV94
Podel.16G086600 0.5kb downstream 0.5kb downstream 18796 true Chr16: 6693373-6712168 Populus deltoides WV94
Podel.16G086600 0.5kb downstream 0.5kb downstream 500 false Chr16: 6693373-6693872 Populus deltoides WV94
Podel.16G086600 1.0kb upstream 1.0kb upstream 19296 true Chr16: 6693873-6713168 Populus deltoides WV94
Podel.16G086600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6712169-6713168 Populus deltoides WV94
Podel.16G086600 1.0kb downstream 1.0kb downstream 19296 true Chr16: 6692873-6712168 Populus deltoides WV94
Podel.16G086600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6692873-6693872 Populus deltoides WV94
Podel.16G086600 2.0kb upstream 2.0kb upstream 20296 true Chr16: 6693873-6714168 Populus deltoides WV94
Podel.16G086600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6712169-6714168 Populus deltoides WV94
Podel.16G086600 2.0kb downstream 2.0kb downstream 20296 true Chr16: 6691873-6712168 Populus deltoides WV94
Podel.16G086600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6691873-6693872 Populus deltoides WV94
Podel.16G086600 5.0kb upstream 5.0kb upstream 23296 true Chr16: 6693873-6717168 Populus deltoides WV94
Podel.16G086600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6712169-6717168 Populus deltoides WV94
Podel.16G086600 5.0kb downstream 5.0kb downstream 23296 true Chr16: 6688873-6712168 Populus deltoides WV94
Podel.16G086600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6688873-6693872 Populus deltoides WV94
Podel.16G086600 10.0kb upstream 10.0kb upstream 28296 true Chr16: 6693873-6722168 Populus deltoides WV94
Podel.16G086600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6712169-6722168 Populus deltoides WV94
Podel.16G086600 10.0kb downstream 10.0kb downstream 28296 true Chr16: 6683873-6712168 Populus deltoides WV94
Podel.16G086600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6683873-6693872 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454995 5262 Malpighiales View MSA
124249716 5268 Malvidae View MSA
124065775 5270 Rosid View MSA
123748568 5271 Pentapetalae View MSA
122793340 5272 Eudicot View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier