Gene : Bradi1g54807 B. distachyon v3.1
Defline:  (1 of 2) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Genomic Order:  6867
Name:  ? Bradi1g54807 Secondary Identifier:  ? PAC:32799780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g54807 0.5kb upstream 0.5kb upstream 13912 true Bd1: 53348344-53362255 Brachypodium distachyon
Bradi1g54807 0.5kb upstream 0.5kb upstream 500 false Bd1: 53361756-53362255 Brachypodium distachyon
Bradi1g54807 0.5kb downstream 0.5kb downstream 13912 true Bd1: 53347844-53361755 Brachypodium distachyon
Bradi1g54807 0.5kb downstream 0.5kb downstream 500 false Bd1: 53347844-53348343 Brachypodium distachyon
Bradi1g54807 1.0kb upstream 1.0kb upstream 14412 true Bd1: 53348344-53362755 Brachypodium distachyon
Bradi1g54807 1.0kb upstream 1.0kb upstream 1000 false Bd1: 53361756-53362755 Brachypodium distachyon
Bradi1g54807 1.0kb downstream 1.0kb downstream 14412 true Bd1: 53347344-53361755 Brachypodium distachyon
Bradi1g54807 1.0kb downstream 1.0kb downstream 1000 false Bd1: 53347344-53348343 Brachypodium distachyon
Bradi1g54807 2.0kb upstream 2.0kb upstream 15412 true Bd1: 53348344-53363755 Brachypodium distachyon
Bradi1g54807 2.0kb upstream 2.0kb upstream 2000 false Bd1: 53361756-53363755 Brachypodium distachyon
Bradi1g54807 2.0kb downstream 2.0kb downstream 15412 true Bd1: 53346344-53361755 Brachypodium distachyon
Bradi1g54807 2.0kb downstream 2.0kb downstream 2000 false Bd1: 53346344-53348343 Brachypodium distachyon
Bradi1g54807 5.0kb upstream 5.0kb upstream 18412 true Bd1: 53348344-53366755 Brachypodium distachyon
Bradi1g54807 5.0kb upstream 5.0kb upstream 5000 false Bd1: 53361756-53366755 Brachypodium distachyon
Bradi1g54807 5.0kb downstream 5.0kb downstream 18412 true Bd1: 53343344-53361755 Brachypodium distachyon
Bradi1g54807 5.0kb downstream 5.0kb downstream 5000 false Bd1: 53343344-53348343 Brachypodium distachyon
Bradi1g54807 10.0kb upstream 10.0kb upstream 23412 true Bd1: 53348344-53371755 Brachypodium distachyon
Bradi1g54807 10.0kb upstream 10.0kb upstream 10000 false Bd1: 53361756-53371755 Brachypodium distachyon
Bradi1g54807 10.0kb downstream 10.0kb downstream 23412 true Bd1: 53338344-53361755 Brachypodium distachyon
Bradi1g54807 10.0kb downstream 10.0kb downstream 10000 false Bd1: 53338344-53348343 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570106 5269 Grass View MSA
122047135 5273 Angiosperm View MSA
121347287 5274 Embryophyte View MSA
123428083 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.762        
cufflinks 2.386       High
cufflinks 1.699        
cufflinks 1.661        
cufflinks 0.514       Low
cufflinks 1.747        
cufflinks 1.885        
cufflinks 1.116        
cufflinks 1.58        
cufflinks 0.692        
cufflinks 2.025        
cufflinks 1.358        
cufflinks 1.089        
cufflinks 1.277        
cufflinks 0.599       Low
cufflinks 1.695        
cufflinks 0.676        
cufflinks 2.177       High
cufflinks 0.881        
cufflinks 0.437       Low
cufflinks 0.955        
cufflinks 1.179        
cufflinks 1.207        
cufflinks 1.32        
cufflinks 1.552        
cufflinks 1.206        
cufflinks 1.281        
cufflinks 1.087        
cufflinks 0.974        
cufflinks 1.353        

0 Strain