Gene : Sobic.002G053350 S. bicolor v3.1.1
Defline:  (1 of 4) PTHR24012:SF362 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Genomic Order:  550
Name:  ? Sobic.002G053350 Secondary Identifier:  ? PAC:37953637
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G053350 0.5kb upstream 0.5kb upstream 6782 true Chr02: 5061879-5068660 Sorghum bicolor
Sobic.002G053350 0.5kb upstream 0.5kb upstream 500 false Chr02: 5068161-5068660 Sorghum bicolor
Sobic.002G053350 0.5kb downstream 0.5kb downstream 6782 true Chr02: 5061379-5068160 Sorghum bicolor
Sobic.002G053350 0.5kb downstream 0.5kb downstream 500 false Chr02: 5061379-5061878 Sorghum bicolor
Sobic.002G053350 1.0kb upstream 1.0kb upstream 7282 true Chr02: 5061879-5069160 Sorghum bicolor
Sobic.002G053350 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5068161-5069160 Sorghum bicolor
Sobic.002G053350 1.0kb downstream 1.0kb downstream 7282 true Chr02: 5060879-5068160 Sorghum bicolor
Sobic.002G053350 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5060879-5061878 Sorghum bicolor
Sobic.002G053350 2.0kb upstream 2.0kb upstream 8282 true Chr02: 5061879-5070160 Sorghum bicolor
Sobic.002G053350 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5068161-5070160 Sorghum bicolor
Sobic.002G053350 2.0kb downstream 2.0kb downstream 8282 true Chr02: 5059879-5068160 Sorghum bicolor
Sobic.002G053350 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5059879-5061878 Sorghum bicolor
Sobic.002G053350 5.0kb upstream 5.0kb upstream 11282 true Chr02: 5061879-5073160 Sorghum bicolor
Sobic.002G053350 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5068161-5073160 Sorghum bicolor
Sobic.002G053350 5.0kb downstream 5.0kb downstream 11282 true Chr02: 5056879-5068160 Sorghum bicolor
Sobic.002G053350 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5056879-5061878 Sorghum bicolor
Sobic.002G053350 10.0kb upstream 10.0kb upstream 16282 true Chr02: 5061879-5078160 Sorghum bicolor
Sobic.002G053350 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5068161-5078160 Sorghum bicolor
Sobic.002G053350 10.0kb downstream 10.0kb downstream 16282 true Chr02: 5051879-5068160 Sorghum bicolor
Sobic.002G053350 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5051879-5061878 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198046 5267 Panicoideae View MSA
124584920 5269 Grass View MSA
122051526 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121312537 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low  
cufflinks 0.01     Low  
cufflinks 0.02     Low  
cufflinks 0.036     Low  
cufflinks 0.111       High
cufflinks 0.073     Low  
cufflinks 0.009     Low  
cufflinks 0.008     Low  
cufflinks 0.158       High
cufflinks 0.232       High
cufflinks 0.011     Low  
cufflinks 0.002     Low Low
cufflinks 0.144       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.276       High
cufflinks 0.016     Low  
cufflinks 0.01     Low  
cufflinks 0.011     Low  
cufflinks 0.023     Low  
cufflinks 0.008     Low  
cufflinks 0.198       High
cufflinks 0.002     Low Low
cufflinks 0.001     Low Low
cufflinks 0.002     Low Low
cufflinks 0.02     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.134       High
cufflinks 0.01     Low  
cufflinks 0.515       High

0 Strain