Gene : Sobic.002G035500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR31072:SF2 - TRANSCRIPTION FACTOR TCP2-RELATED Genomic Order:  367
Name:  ? Sobic.002G035500 Secondary Identifier:  ? PAC:37950827
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G035500 0.5kb upstream 0.5kb upstream 7273 true Chr02: 3332482-3339754 Sorghum bicolor
Sobic.002G035500 0.5kb upstream 0.5kb upstream 500 false Chr02: 3332482-3332981 Sorghum bicolor
Sobic.002G035500 0.5kb downstream 0.5kb downstream 7273 true Chr02: 3332982-3340254 Sorghum bicolor
Sobic.002G035500 0.5kb downstream 0.5kb downstream 500 false Chr02: 3339755-3340254 Sorghum bicolor
Sobic.002G035500 1.0kb upstream 1.0kb upstream 7773 true Chr02: 3331982-3339754 Sorghum bicolor
Sobic.002G035500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3331982-3332981 Sorghum bicolor
Sobic.002G035500 1.0kb downstream 1.0kb downstream 7773 true Chr02: 3332982-3340754 Sorghum bicolor
Sobic.002G035500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3339755-3340754 Sorghum bicolor
Sobic.002G035500 2.0kb upstream 2.0kb upstream 8773 true Chr02: 3330982-3339754 Sorghum bicolor
Sobic.002G035500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3330982-3332981 Sorghum bicolor
Sobic.002G035500 2.0kb downstream 2.0kb downstream 8773 true Chr02: 3332982-3341754 Sorghum bicolor
Sobic.002G035500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3339755-3341754 Sorghum bicolor
Sobic.002G035500 5.0kb upstream 5.0kb upstream 11773 true Chr02: 3327982-3339754 Sorghum bicolor
Sobic.002G035500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3327982-3332981 Sorghum bicolor
Sobic.002G035500 5.0kb downstream 5.0kb downstream 11773 true Chr02: 3332982-3344754 Sorghum bicolor
Sobic.002G035500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3339755-3344754 Sorghum bicolor
Sobic.002G035500 10.0kb upstream 10.0kb upstream 16773 true Chr02: 3322982-3339754 Sorghum bicolor
Sobic.002G035500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3322982-3332981 Sorghum bicolor
Sobic.002G035500 10.0kb downstream 10.0kb downstream 16773 true Chr02: 3332982-3349754 Sorghum bicolor
Sobic.002G035500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3339755-3349754 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186294 5267 Panicoideae View MSA
124587615 5269 Grass View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.88       High
cufflinks 0.069       Low
cufflinks 0.031     Low Low
cufflinks 0.113       Low
cufflinks 1.504        
cufflinks 1.596        
cufflinks 1.712        
cufflinks 0.604        
cufflinks 0.774        
cufflinks 0.71        
cufflinks 1.194        
cufflinks 1.112        
cufflinks 0.901        
cufflinks 1.338        
cufflinks 1.013        
cufflinks 0.065     Low Low
cufflinks 1.496        
cufflinks 1.532        
cufflinks 0.521        
cufflinks 1.424        
cufflinks 1.841        
cufflinks 1.379        
cufflinks 1.034        
cufflinks 1.081        
cufflinks 0.093       Low
cufflinks 0.17       Low
cufflinks 0.568        
cufflinks 0.954        
cufflinks 1.235        
cufflinks 1.321        

0 Strain