Gene : Sobic.005G211200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR23241//PTHR23241:SF55 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2217
Name:  ? Sobic.005G211200 Secondary Identifier:  ? PAC:37923984
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G211200 0.5kb upstream 0.5kb upstream 5053 true Chr05: 69759253-69764305 Sorghum bicolor
Sobic.005G211200 0.5kb upstream 0.5kb upstream 500 false Chr05: 69763806-69764305 Sorghum bicolor
Sobic.005G211200 0.5kb downstream 0.5kb downstream 5053 true Chr05: 69758753-69763805 Sorghum bicolor
Sobic.005G211200 0.5kb downstream 0.5kb downstream 500 false Chr05: 69758753-69759252 Sorghum bicolor
Sobic.005G211200 1.0kb upstream 1.0kb upstream 5553 true Chr05: 69759253-69764805 Sorghum bicolor
Sobic.005G211200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 69763806-69764805 Sorghum bicolor
Sobic.005G211200 1.0kb downstream 1.0kb downstream 5553 true Chr05: 69758253-69763805 Sorghum bicolor
Sobic.005G211200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 69758253-69759252 Sorghum bicolor
Sobic.005G211200 2.0kb upstream 2.0kb upstream 6553 true Chr05: 69759253-69765805 Sorghum bicolor
Sobic.005G211200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 69763806-69765805 Sorghum bicolor
Sobic.005G211200 2.0kb downstream 2.0kb downstream 6553 true Chr05: 69757253-69763805 Sorghum bicolor
Sobic.005G211200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 69757253-69759252 Sorghum bicolor
Sobic.005G211200 5.0kb upstream 5.0kb upstream 9553 true Chr05: 69759253-69768805 Sorghum bicolor
Sobic.005G211200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 69763806-69768805 Sorghum bicolor
Sobic.005G211200 5.0kb downstream 5.0kb downstream 9553 true Chr05: 69754253-69763805 Sorghum bicolor
Sobic.005G211200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 69754253-69759252 Sorghum bicolor
Sobic.005G211200 10.0kb upstream 10.0kb upstream 14553 true Chr05: 69759253-69773805 Sorghum bicolor
Sobic.005G211200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 69763806-69773805 Sorghum bicolor
Sobic.005G211200 10.0kb downstream 10.0kb downstream 14553 true Chr05: 69749253-69763805 Sorghum bicolor
Sobic.005G211200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 69749253-69759252 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181682 5267 Panicoideae View MSA
124573218 5269 Grass View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.09       High
cufflinks 0.743       Low
cufflinks 2.651        
cufflinks 3.541        
cufflinks 2.056        
cufflinks 1.838        
cufflinks 1.792        
cufflinks 0.748       Low
cufflinks 3.377        
cufflinks 2.944        
cufflinks 2.36        
cufflinks 4.342       High
cufflinks 1.432        
cufflinks 5.249       High
cufflinks 2.526        
cufflinks 2.206        
cufflinks 1.837        
cufflinks 2.1        
cufflinks 1.362        
cufflinks 2.45        
cufflinks 3.966       High
cufflinks 2.083        
cufflinks 3.686        
cufflinks 3.547        
cufflinks 2.274        
cufflinks 0.6       Low
cufflinks 2.482        
cufflinks 1.687        
cufflinks 0.839       Low
cufflinks 4.149       High

0 Strain