Gene : Sobic.002G028700 S. bicolor v3.1.1
Defline:  (1 of 2) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  297
Name:  ? Sobic.002G028700 Secondary Identifier:  ? PAC:37953673
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-3781 Sorghum bicolor pathologic  
Sbicolor PWY-4302 Sorghum bicolor pathologic  
Sbicolor PWY-5464 Sorghum bicolor pathologic  
Sbicolor PWY-561 Sorghum bicolor pathologic  
Sbicolor PWY-5690 Sorghum bicolor pathologic  
Sbicolor PWY-7279 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G028700 0.5kb upstream 0.5kb upstream 6344 true Chr02: 2627406-2633749 Sorghum bicolor
Sobic.002G028700 0.5kb upstream 0.5kb upstream 500 false Chr02: 2633250-2633749 Sorghum bicolor
Sobic.002G028700 0.5kb downstream 0.5kb downstream 6344 true Chr02: 2626906-2633249 Sorghum bicolor
Sobic.002G028700 0.5kb downstream 0.5kb downstream 500 false Chr02: 2626906-2627405 Sorghum bicolor
Sobic.002G028700 1.0kb upstream 1.0kb upstream 6844 true Chr02: 2627406-2634249 Sorghum bicolor
Sobic.002G028700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2633250-2634249 Sorghum bicolor
Sobic.002G028700 1.0kb downstream 1.0kb downstream 6844 true Chr02: 2626406-2633249 Sorghum bicolor
Sobic.002G028700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2626406-2627405 Sorghum bicolor
Sobic.002G028700 2.0kb upstream 2.0kb upstream 7844 true Chr02: 2627406-2635249 Sorghum bicolor
Sobic.002G028700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2633250-2635249 Sorghum bicolor
Sobic.002G028700 2.0kb downstream 2.0kb downstream 7844 true Chr02: 2625406-2633249 Sorghum bicolor
Sobic.002G028700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2625406-2627405 Sorghum bicolor
Sobic.002G028700 5.0kb upstream 5.0kb upstream 10844 true Chr02: 2627406-2638249 Sorghum bicolor
Sobic.002G028700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2633250-2638249 Sorghum bicolor
Sobic.002G028700 5.0kb downstream 5.0kb downstream 10844 true Chr02: 2622406-2633249 Sorghum bicolor
Sobic.002G028700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2622406-2627405 Sorghum bicolor
Sobic.002G028700 10.0kb upstream 10.0kb upstream 15844 true Chr02: 2627406-2643249 Sorghum bicolor
Sobic.002G028700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2633250-2643249 Sorghum bicolor
Sobic.002G028700 10.0kb downstream 10.0kb downstream 15844 true Chr02: 2617406-2633249 Sorghum bicolor
Sobic.002G028700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2617406-2627405 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190568 5267 Panicoideae View MSA
124571712 5269 Grass View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.388     High  
cufflinks 10.525     High Low
cufflinks 16.851     High  
cufflinks 18.346     High  
cufflinks 21.922     High  
cufflinks 9.275       Low
cufflinks 21.405     High  
cufflinks 10.451     High Low
cufflinks 28.341     High  
cufflinks 42.82     High High
cufflinks 37.035     High  
cufflinks 32.249     High  
cufflinks 21.864     High  
cufflinks 38.727     High High
cufflinks 30.962     High  
cufflinks 13.794     High  
cufflinks 22.176     High  
cufflinks 21.68     High  
cufflinks 8.445       Low
cufflinks 24.752     High  
cufflinks 19.785     High  
cufflinks 44.296     High High
cufflinks 41.07     High High
cufflinks 42.585     High High
cufflinks 9.955     High Low
cufflinks 13.463     High  
cufflinks 27.586     High  
cufflinks 7.507       Low
cufflinks 10.585       Low
cufflinks 31.269     High  

0 Strain