Gene : Sobic.002G031700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Genomic Order:  328
Name:  ? Sobic.002G031700 Secondary Identifier:  ? PAC:37951807
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G031700 0.5kb upstream 0.5kb upstream 3912 true Chr02: 2897200-2901111 Sorghum bicolor
Sobic.002G031700 0.5kb upstream 0.5kb upstream 500 false Chr02: 2900612-2901111 Sorghum bicolor
Sobic.002G031700 0.5kb downstream 0.5kb downstream 3912 true Chr02: 2896700-2900611 Sorghum bicolor
Sobic.002G031700 0.5kb downstream 0.5kb downstream 500 false Chr02: 2896700-2897199 Sorghum bicolor
Sobic.002G031700 1.0kb upstream 1.0kb upstream 4412 true Chr02: 2897200-2901611 Sorghum bicolor
Sobic.002G031700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2900612-2901611 Sorghum bicolor
Sobic.002G031700 1.0kb downstream 1.0kb downstream 4412 true Chr02: 2896200-2900611 Sorghum bicolor
Sobic.002G031700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2896200-2897199 Sorghum bicolor
Sobic.002G031700 2.0kb upstream 2.0kb upstream 5412 true Chr02: 2897200-2902611 Sorghum bicolor
Sobic.002G031700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2900612-2902611 Sorghum bicolor
Sobic.002G031700 2.0kb downstream 2.0kb downstream 5412 true Chr02: 2895200-2900611 Sorghum bicolor
Sobic.002G031700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2895200-2897199 Sorghum bicolor
Sobic.002G031700 5.0kb upstream 5.0kb upstream 8412 true Chr02: 2897200-2905611 Sorghum bicolor
Sobic.002G031700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2900612-2905611 Sorghum bicolor
Sobic.002G031700 5.0kb downstream 5.0kb downstream 8412 true Chr02: 2892200-2900611 Sorghum bicolor
Sobic.002G031700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2892200-2897199 Sorghum bicolor
Sobic.002G031700 10.0kb upstream 10.0kb upstream 13412 true Chr02: 2897200-2910611 Sorghum bicolor
Sobic.002G031700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2900612-2910611 Sorghum bicolor
Sobic.002G031700 10.0kb downstream 10.0kb downstream 13412 true Chr02: 2887200-2900611 Sorghum bicolor
Sobic.002G031700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2887200-2897199 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176782 5267 Panicoideae View MSA
124571216 5269 Grass View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.632        
cufflinks 0.058       Low
cufflinks 0.113       Low
cufflinks 0.4        
cufflinks 0.958       High
cufflinks 0.364        
cufflinks 0.42        
cufflinks 0.064     Low Low
cufflinks 1.092       High
cufflinks 1.068       High
cufflinks 0.311        
cufflinks 0.494        
cufflinks 0.357        
cufflinks 0.378        
cufflinks 0.604        
cufflinks 0.148        
cufflinks 0.424        
cufflinks 0.409        
cufflinks 0.063     Low Low
cufflinks 0.507        
cufflinks 2.064       High
cufflinks 0.485        
cufflinks 0.41        
cufflinks 0.431        
cufflinks 0.072       Low
cufflinks 0.058       Low
cufflinks 0.291        
cufflinks 0.524        
cufflinks 0.245        
cufflinks 0.873       High

0 Strain