Gene : Sobic.002G004700 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR30546//PTHR30546:SF4 - FLAVODOXIN-RELATED PROTEIN WRBA-RELATED // SUBFAMILY NOT NAMED Genomic Order:  47
Name:  ? Sobic.002G004700 Secondary Identifier:  ? PAC:37954420
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7279 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G004700 0.5kb upstream 0.5kb upstream 2412 true Chr02: 510153-512564 Sorghum bicolor
Sobic.002G004700 0.5kb upstream 0.5kb upstream 500 false Chr02: 512065-512564 Sorghum bicolor
Sobic.002G004700 0.5kb downstream 0.5kb downstream 2412 true Chr02: 509653-512064 Sorghum bicolor
Sobic.002G004700 0.5kb downstream 0.5kb downstream 500 false Chr02: 509653-510152 Sorghum bicolor
Sobic.002G004700 1.0kb upstream 1.0kb upstream 2912 true Chr02: 510153-513064 Sorghum bicolor
Sobic.002G004700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 512065-513064 Sorghum bicolor
Sobic.002G004700 1.0kb downstream 1.0kb downstream 2912 true Chr02: 509153-512064 Sorghum bicolor
Sobic.002G004700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 509153-510152 Sorghum bicolor
Sobic.002G004700 2.0kb upstream 2.0kb upstream 3912 true Chr02: 510153-514064 Sorghum bicolor
Sobic.002G004700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 512065-514064 Sorghum bicolor
Sobic.002G004700 2.0kb downstream 2.0kb downstream 3912 true Chr02: 508153-512064 Sorghum bicolor
Sobic.002G004700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 508153-510152 Sorghum bicolor
Sobic.002G004700 5.0kb upstream 5.0kb upstream 6912 true Chr02: 510153-517064 Sorghum bicolor
Sobic.002G004700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 512065-517064 Sorghum bicolor
Sobic.002G004700 5.0kb downstream 5.0kb downstream 6912 true Chr02: 505153-512064 Sorghum bicolor
Sobic.002G004700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 505153-510152 Sorghum bicolor
Sobic.002G004700 10.0kb upstream 10.0kb upstream 11912 true Chr02: 510153-522064 Sorghum bicolor
Sobic.002G004700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 512065-522064 Sorghum bicolor
Sobic.002G004700 10.0kb downstream 10.0kb downstream 11912 true Chr02: 500153-512064 Sorghum bicolor
Sobic.002G004700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 500153-510152 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994085 5273 Angiosperm View MSA
122189559 5267 Panicoideae View MSA
124582829 5269 Grass View MSA
121352058 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.995       High
cufflinks 0.667        
cufflinks 0.099       Low
cufflinks 0.089       Low
cufflinks 1.968        
cufflinks 0.161       Low
cufflinks 2.676        
cufflinks 1.836        
cufflinks 0.101       Low
cufflinks 0.229       Low
cufflinks 9.762       High
cufflinks 10.429       High
cufflinks 0.137       Low
cufflinks 3.553        
cufflinks 0.229       Low
cufflinks 0.228       Low
cufflinks 3.582        
cufflinks 2.869        
cufflinks 1.245        
cufflinks 0.839        
cufflinks 1.252        
cufflinks 3.158        
cufflinks 6.881       High
cufflinks 6.371       High
cufflinks 1.67        
cufflinks 1.401        
cufflinks 5.2       High
cufflinks 0.2       Low
cufflinks 1.219        
cufflinks 0.526        

0 Strain