Gene : Sobic.006G059200 S. bicolor v3.1.1
Defline:  (1 of 1) K18464 - WASH complex subunit strumpellin (KIAA0196) Genomic Order:  624
Name:  ? Sobic.006G059200 Secondary Identifier:  ? PAC:37949344
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G059200 0.5kb upstream 0.5kb upstream 7082 true Chr06: 40826865-40833946 Sorghum bicolor
Sobic.006G059200 0.5kb upstream 0.5kb upstream 500 false Chr06: 40833447-40833946 Sorghum bicolor
Sobic.006G059200 0.5kb downstream 0.5kb downstream 7082 true Chr06: 40826365-40833446 Sorghum bicolor
Sobic.006G059200 0.5kb downstream 0.5kb downstream 500 false Chr06: 40826365-40826864 Sorghum bicolor
Sobic.006G059200 1.0kb upstream 1.0kb upstream 7582 true Chr06: 40826865-40834446 Sorghum bicolor
Sobic.006G059200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40833447-40834446 Sorghum bicolor
Sobic.006G059200 1.0kb downstream 1.0kb downstream 7582 true Chr06: 40825865-40833446 Sorghum bicolor
Sobic.006G059200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40825865-40826864 Sorghum bicolor
Sobic.006G059200 2.0kb upstream 2.0kb upstream 8582 true Chr06: 40826865-40835446 Sorghum bicolor
Sobic.006G059200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40833447-40835446 Sorghum bicolor
Sobic.006G059200 2.0kb downstream 2.0kb downstream 8582 true Chr06: 40824865-40833446 Sorghum bicolor
Sobic.006G059200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40824865-40826864 Sorghum bicolor
Sobic.006G059200 5.0kb upstream 5.0kb upstream 11582 true Chr06: 40826865-40838446 Sorghum bicolor
Sobic.006G059200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40833447-40838446 Sorghum bicolor
Sobic.006G059200 5.0kb downstream 5.0kb downstream 11582 true Chr06: 40821865-40833446 Sorghum bicolor
Sobic.006G059200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40821865-40826864 Sorghum bicolor
Sobic.006G059200 10.0kb upstream 10.0kb upstream 16582 true Chr06: 40826865-40843446 Sorghum bicolor
Sobic.006G059200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40833447-40843446 Sorghum bicolor
Sobic.006G059200 10.0kb downstream 10.0kb downstream 16582 true Chr06: 40816865-40833446 Sorghum bicolor
Sobic.006G059200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40816865-40826864 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122005877 5273 Angiosperm View MSA
122145560 5267 Panicoideae Singleton cluster - no MSA
124438306 5269 Grass Singleton cluster - no MSA
121276010 5274 Embryophyte View MSA
123314317 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306        
cufflinks 0.118       Low
cufflinks 0.254        
cufflinks 0.463        
cufflinks 0.847       High
cufflinks 0.814       High
cufflinks 0.247        
cufflinks 0.264        
cufflinks 0.978       High
cufflinks 0.95       High
cufflinks 0.368        
cufflinks 0.4        
cufflinks 1.051       High
cufflinks 0.249        
cufflinks 0.64        
cufflinks 0.241        
cufflinks 0.283        
cufflinks 0.195       Low
cufflinks 0.224        
cufflinks 0.326        
cufflinks 1.166       High
cufflinks 0.353        
cufflinks 0.271        
cufflinks 0.221       Low
cufflinks 0.312        
cufflinks 0.154       Low
cufflinks 0.536        
cufflinks 0.369        
cufflinks 0.264        
cufflinks 0.572        

0 Strain