Gene : Sobic.006G065600 S. bicolor v3.1.1
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  690
Name:  ? Sobic.006G065600 Secondary Identifier:  ? PAC:37947728
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G065600 0.5kb upstream 0.5kb upstream 10030 true Chr06: 42540881-42550910 Sorghum bicolor
Sobic.006G065600 0.5kb upstream 0.5kb upstream 500 false Chr06: 42550411-42550910 Sorghum bicolor
Sobic.006G065600 0.5kb downstream 0.5kb downstream 10030 true Chr06: 42540381-42550410 Sorghum bicolor
Sobic.006G065600 0.5kb downstream 0.5kb downstream 500 false Chr06: 42540381-42540880 Sorghum bicolor
Sobic.006G065600 1.0kb upstream 1.0kb upstream 10530 true Chr06: 42540881-42551410 Sorghum bicolor
Sobic.006G065600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42550411-42551410 Sorghum bicolor
Sobic.006G065600 1.0kb downstream 1.0kb downstream 10530 true Chr06: 42539881-42550410 Sorghum bicolor
Sobic.006G065600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42539881-42540880 Sorghum bicolor
Sobic.006G065600 2.0kb upstream 2.0kb upstream 11530 true Chr06: 42540881-42552410 Sorghum bicolor
Sobic.006G065600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42550411-42552410 Sorghum bicolor
Sobic.006G065600 2.0kb downstream 2.0kb downstream 11530 true Chr06: 42538881-42550410 Sorghum bicolor
Sobic.006G065600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42538881-42540880 Sorghum bicolor
Sobic.006G065600 5.0kb upstream 5.0kb upstream 14530 true Chr06: 42540881-42555410 Sorghum bicolor
Sobic.006G065600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42550411-42555410 Sorghum bicolor
Sobic.006G065600 5.0kb downstream 5.0kb downstream 14530 true Chr06: 42535881-42550410 Sorghum bicolor
Sobic.006G065600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42535881-42540880 Sorghum bicolor
Sobic.006G065600 10.0kb upstream 10.0kb upstream 19530 true Chr06: 42540881-42560410 Sorghum bicolor
Sobic.006G065600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42550411-42560410 Sorghum bicolor
Sobic.006G065600 10.0kb downstream 10.0kb downstream 19530 true Chr06: 42530881-42550410 Sorghum bicolor
Sobic.006G065600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42530881-42540880 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187974 5267 Panicoideae View MSA
124569339 5269 Grass View MSA
122044071 5273 Angiosperm View MSA
121345881 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156       Low
cufflinks 1.213        
cufflinks 2.054       High
cufflinks 3.667       High
cufflinks 0.279       Low
cufflinks 1.388       High
cufflinks 0.777        
cufflinks 0.89        
cufflinks 0.923        
cufflinks 0.901        
cufflinks 0.419        
cufflinks 0.475        
cufflinks 0.675        
cufflinks 0.331        
cufflinks 0.789        
cufflinks 1.667       High
cufflinks 0.844        
cufflinks 0.9        
cufflinks 0.852        
cufflinks 1.519       High
cufflinks 0.292       Low
cufflinks 0.25       Low
cufflinks 0.374        
cufflinks 0.302       Low
cufflinks 2.183       High
cufflinks 1.201        
cufflinks 0.911        
cufflinks 0.64        
cufflinks 0.801        
cufflinks 0.732        

0 Strain