Gene : Sobic.002G121800 S. bicolor v3.1.1
Defline:  (1 of 1) PF00083//PF06609 - Sugar (and other) transporter (Sugar_tr) // Fungal trichothecene efflux pump (TRI12) (TRI12) Genomic Order:  1239
Name:  ? Sobic.002G121800 Secondary Identifier:  ? PAC:37952639
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G121800 0.5kb upstream 0.5kb upstream 4699 true Chr02: 16092271-16096969 Sorghum bicolor
Sobic.002G121800 0.5kb upstream 0.5kb upstream 500 false Chr02: 16096470-16096969 Sorghum bicolor
Sobic.002G121800 0.5kb downstream 0.5kb downstream 4699 true Chr02: 16091771-16096469 Sorghum bicolor
Sobic.002G121800 0.5kb downstream 0.5kb downstream 500 false Chr02: 16091771-16092270 Sorghum bicolor
Sobic.002G121800 1.0kb upstream 1.0kb upstream 5199 true Chr02: 16092271-16097469 Sorghum bicolor
Sobic.002G121800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16096470-16097469 Sorghum bicolor
Sobic.002G121800 1.0kb downstream 1.0kb downstream 5199 true Chr02: 16091271-16096469 Sorghum bicolor
Sobic.002G121800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16091271-16092270 Sorghum bicolor
Sobic.002G121800 2.0kb upstream 2.0kb upstream 6199 true Chr02: 16092271-16098469 Sorghum bicolor
Sobic.002G121800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16096470-16098469 Sorghum bicolor
Sobic.002G121800 2.0kb downstream 2.0kb downstream 6199 true Chr02: 16090271-16096469 Sorghum bicolor
Sobic.002G121800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16090271-16092270 Sorghum bicolor
Sobic.002G121800 5.0kb upstream 5.0kb upstream 9199 true Chr02: 16092271-16101469 Sorghum bicolor
Sobic.002G121800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16096470-16101469 Sorghum bicolor
Sobic.002G121800 5.0kb downstream 5.0kb downstream 9199 true Chr02: 16087271-16096469 Sorghum bicolor
Sobic.002G121800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16087271-16092270 Sorghum bicolor
Sobic.002G121800 10.0kb upstream 10.0kb upstream 14199 true Chr02: 16092271-16106469 Sorghum bicolor
Sobic.002G121800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16096470-16106469 Sorghum bicolor
Sobic.002G121800 10.0kb downstream 10.0kb downstream 14199 true Chr02: 16082271-16096469 Sorghum bicolor
Sobic.002G121800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16082271-16092270 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188463 5267 Panicoideae View MSA
124465970 5269 Grass View MSA
122041664 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121348445 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.247       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  

0 Strain