Gene : Sobic.002G118600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR19305//PTHR19305:SF11 - SYNAPTOSOMAL ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1207
Name:  ? Sobic.002G118600 Secondary Identifier:  ? PAC:37951600
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G118600 0.5kb upstream 0.5kb upstream 3211 true Chr02: 14778840-14782050 Sorghum bicolor
Sobic.002G118600 0.5kb upstream 0.5kb upstream 500 false Chr02: 14781551-14782050 Sorghum bicolor
Sobic.002G118600 0.5kb downstream 0.5kb downstream 3211 true Chr02: 14778340-14781550 Sorghum bicolor
Sobic.002G118600 0.5kb downstream 0.5kb downstream 500 false Chr02: 14778340-14778839 Sorghum bicolor
Sobic.002G118600 1.0kb upstream 1.0kb upstream 3711 true Chr02: 14778840-14782550 Sorghum bicolor
Sobic.002G118600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14781551-14782550 Sorghum bicolor
Sobic.002G118600 1.0kb downstream 1.0kb downstream 3711 true Chr02: 14777840-14781550 Sorghum bicolor
Sobic.002G118600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14777840-14778839 Sorghum bicolor
Sobic.002G118600 2.0kb upstream 2.0kb upstream 4711 true Chr02: 14778840-14783550 Sorghum bicolor
Sobic.002G118600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14781551-14783550 Sorghum bicolor
Sobic.002G118600 2.0kb downstream 2.0kb downstream 4711 true Chr02: 14776840-14781550 Sorghum bicolor
Sobic.002G118600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14776840-14778839 Sorghum bicolor
Sobic.002G118600 5.0kb upstream 5.0kb upstream 7711 true Chr02: 14778840-14786550 Sorghum bicolor
Sobic.002G118600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14781551-14786550 Sorghum bicolor
Sobic.002G118600 5.0kb downstream 5.0kb downstream 7711 true Chr02: 14773840-14781550 Sorghum bicolor
Sobic.002G118600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14773840-14778839 Sorghum bicolor
Sobic.002G118600 10.0kb upstream 10.0kb upstream 12711 true Chr02: 14778840-14791550 Sorghum bicolor
Sobic.002G118600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14781551-14791550 Sorghum bicolor
Sobic.002G118600 10.0kb downstream 10.0kb downstream 12711 true Chr02: 14768840-14781550 Sorghum bicolor
Sobic.002G118600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14768840-14778839 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183276 5267 Panicoideae View MSA
124579554 5269 Grass View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.209        
cufflinks 6.379     High  
cufflinks 60.276     High High
cufflinks 60.756     High High
cufflinks 17.171     High  
cufflinks 62.042     High High
cufflinks 2.757       Low
cufflinks 3.788        
cufflinks 24.982     High  
cufflinks 21.55     High  
cufflinks 22.1     High  
cufflinks 7.652        
cufflinks 29.694     High  
cufflinks 6.669        
cufflinks 28.037     High  
cufflinks 12.582     High  
cufflinks 2.254       Low
cufflinks 2.28       Low
cufflinks 51.968     High High
cufflinks 2.616       Low
cufflinks 1.561       Low
cufflinks 6.326        
cufflinks 5.115        
cufflinks 4.749        
cufflinks 19.969     High  
cufflinks 6.906     High  
cufflinks 45.793     High High
cufflinks 10.615     High  
cufflinks 1.936       Low
cufflinks 21.111     High  

0 Strain