Gene : Sobic.002G101400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10996:SF108 - D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN Genomic Order:  1029
Name:  ? Sobic.002G101400 Secondary Identifier:  ? PAC:37950981
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G101400 0.5kb upstream 0.5kb upstream 4748 true Chr02: 11459283-11464030 Sorghum bicolor
Sobic.002G101400 0.5kb upstream 0.5kb upstream 500 false Chr02: 11459283-11459782 Sorghum bicolor
Sobic.002G101400 0.5kb downstream 0.5kb downstream 4748 true Chr02: 11459783-11464530 Sorghum bicolor
Sobic.002G101400 0.5kb downstream 0.5kb downstream 500 false Chr02: 11464031-11464530 Sorghum bicolor
Sobic.002G101400 1.0kb upstream 1.0kb upstream 5248 true Chr02: 11458783-11464030 Sorghum bicolor
Sobic.002G101400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11458783-11459782 Sorghum bicolor
Sobic.002G101400 1.0kb downstream 1.0kb downstream 5248 true Chr02: 11459783-11465030 Sorghum bicolor
Sobic.002G101400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11464031-11465030 Sorghum bicolor
Sobic.002G101400 2.0kb upstream 2.0kb upstream 6248 true Chr02: 11457783-11464030 Sorghum bicolor
Sobic.002G101400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11457783-11459782 Sorghum bicolor
Sobic.002G101400 2.0kb downstream 2.0kb downstream 6248 true Chr02: 11459783-11466030 Sorghum bicolor
Sobic.002G101400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11464031-11466030 Sorghum bicolor
Sobic.002G101400 5.0kb upstream 5.0kb upstream 9248 true Chr02: 11454783-11464030 Sorghum bicolor
Sobic.002G101400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11454783-11459782 Sorghum bicolor
Sobic.002G101400 5.0kb downstream 5.0kb downstream 9248 true Chr02: 11459783-11469030 Sorghum bicolor
Sobic.002G101400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11464031-11469030 Sorghum bicolor
Sobic.002G101400 10.0kb upstream 10.0kb upstream 14248 true Chr02: 11449783-11464030 Sorghum bicolor
Sobic.002G101400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11449783-11459782 Sorghum bicolor
Sobic.002G101400 10.0kb downstream 10.0kb downstream 14248 true Chr02: 11459783-11474030 Sorghum bicolor
Sobic.002G101400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11464031-11474030 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193018 5267 Panicoideae View MSA
124587466 5269 Grass View MSA
122051675 5273 Angiosperm View MSA
121344696 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.651        
cufflinks 0.227        
cufflinks 0.038     Low Low
cufflinks 0.026     Low Low
cufflinks 1.469        
cufflinks 0.059     Low Low
cufflinks 1.132        
cufflinks 0.225        
cufflinks 0.213        
cufflinks 0.599        
cufflinks 39.537     High High
cufflinks 62.359     High High
cufflinks 0.381        
cufflinks 44.123     High High
cufflinks 0.602        
cufflinks 0.072     Low Low
cufflinks 0.786        
cufflinks 0.872        
cufflinks 0.028     Low Low
cufflinks 0.864        
cufflinks 4.191        
cufflinks 12.112     High High
cufflinks 45.847     High High
cufflinks 39.679     High High
cufflinks 0.204        
cufflinks 0.218        
cufflinks 48.12     High High
cufflinks 0.021     Low Low
cufflinks 0.184        
cufflinks 0.472        

0 Strain