Gene : Sobic.002G087000 S. bicolor v3.1.1
Defline:  (1 of 2) K02739 - 20S proteasome subunit beta 2 (PSMB7) Genomic Order:  890
Name:  ? Sobic.002G087000 Secondary Identifier:  ? PAC:37952136
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G087000 0.5kb upstream 0.5kb upstream 5155 true Chr02: 9209775-9214929 Sorghum bicolor
Sobic.002G087000 0.5kb upstream 0.5kb upstream 500 false Chr02: 9214430-9214929 Sorghum bicolor
Sobic.002G087000 0.5kb downstream 0.5kb downstream 5155 true Chr02: 9209275-9214429 Sorghum bicolor
Sobic.002G087000 0.5kb downstream 0.5kb downstream 500 false Chr02: 9209275-9209774 Sorghum bicolor
Sobic.002G087000 1.0kb upstream 1.0kb upstream 5655 true Chr02: 9209775-9215429 Sorghum bicolor
Sobic.002G087000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9214430-9215429 Sorghum bicolor
Sobic.002G087000 1.0kb downstream 1.0kb downstream 5655 true Chr02: 9208775-9214429 Sorghum bicolor
Sobic.002G087000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9208775-9209774 Sorghum bicolor
Sobic.002G087000 2.0kb upstream 2.0kb upstream 6655 true Chr02: 9209775-9216429 Sorghum bicolor
Sobic.002G087000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9214430-9216429 Sorghum bicolor
Sobic.002G087000 2.0kb downstream 2.0kb downstream 6655 true Chr02: 9207775-9214429 Sorghum bicolor
Sobic.002G087000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9207775-9209774 Sorghum bicolor
Sobic.002G087000 5.0kb upstream 5.0kb upstream 9655 true Chr02: 9209775-9219429 Sorghum bicolor
Sobic.002G087000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9214430-9219429 Sorghum bicolor
Sobic.002G087000 5.0kb downstream 5.0kb downstream 9655 true Chr02: 9204775-9214429 Sorghum bicolor
Sobic.002G087000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9204775-9209774 Sorghum bicolor
Sobic.002G087000 10.0kb upstream 10.0kb upstream 14655 true Chr02: 9209775-9224429 Sorghum bicolor
Sobic.002G087000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9214430-9224429 Sorghum bicolor
Sobic.002G087000 10.0kb downstream 10.0kb downstream 14655 true Chr02: 9199775-9214429 Sorghum bicolor
Sobic.002G087000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9199775-9209774 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198865 5267 Panicoideae View MSA
124571922 5269 Grass View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.804     High  
cufflinks 1.632       Low
cufflinks 5.063        
cufflinks 7.371        
cufflinks 12.888     High  
cufflinks 5.097        
cufflinks 9.046        
cufflinks 3.427       Low
cufflinks 11.752        
cufflinks 12.645     High  
cufflinks 10.38        
cufflinks 9.796        
cufflinks 9.871        
cufflinks 11.659     High  
cufflinks 9.87        
cufflinks 3.873       Low
cufflinks 9.603        
cufflinks 9.934        
cufflinks 3.463       Low
cufflinks 10.132        
cufflinks 16.095     High High
cufflinks 14.997     High  
cufflinks 12.593     High  
cufflinks 12.809     High  
cufflinks 3.062       Low
cufflinks 1.428       Low
cufflinks 12.095     High  
cufflinks 2.545       Low
cufflinks 9.802        
cufflinks 13.593     High  

0 Strain