Gene : Sobic.002G213400 S. bicolor v3.1.1
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  2180
Name:  ? Sobic.002G213400 Secondary Identifier:  ? PAC:37952596
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G213400 0.5kb upstream 0.5kb upstream 11313 true Chr02: 60549676-60560988 Sorghum bicolor
Sobic.002G213400 0.5kb upstream 0.5kb upstream 500 false Chr02: 60549676-60550175 Sorghum bicolor
Sobic.002G213400 0.5kb downstream 0.5kb downstream 11313 true Chr02: 60550176-60561488 Sorghum bicolor
Sobic.002G213400 0.5kb downstream 0.5kb downstream 500 false Chr02: 60560989-60561488 Sorghum bicolor
Sobic.002G213400 1.0kb upstream 1.0kb upstream 11813 true Chr02: 60549176-60560988 Sorghum bicolor
Sobic.002G213400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 60549176-60550175 Sorghum bicolor
Sobic.002G213400 1.0kb downstream 1.0kb downstream 11813 true Chr02: 60550176-60561988 Sorghum bicolor
Sobic.002G213400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 60560989-60561988 Sorghum bicolor
Sobic.002G213400 2.0kb upstream 2.0kb upstream 12813 true Chr02: 60548176-60560988 Sorghum bicolor
Sobic.002G213400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 60548176-60550175 Sorghum bicolor
Sobic.002G213400 2.0kb downstream 2.0kb downstream 12813 true Chr02: 60550176-60562988 Sorghum bicolor
Sobic.002G213400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 60560989-60562988 Sorghum bicolor
Sobic.002G213400 5.0kb upstream 5.0kb upstream 15813 true Chr02: 60545176-60560988 Sorghum bicolor
Sobic.002G213400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 60545176-60550175 Sorghum bicolor
Sobic.002G213400 5.0kb downstream 5.0kb downstream 15813 true Chr02: 60550176-60565988 Sorghum bicolor
Sobic.002G213400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 60560989-60565988 Sorghum bicolor
Sobic.002G213400 10.0kb upstream 10.0kb upstream 20813 true Chr02: 60540176-60560988 Sorghum bicolor
Sobic.002G213400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 60540176-60550175 Sorghum bicolor
Sobic.002G213400 10.0kb downstream 10.0kb downstream 20813 true Chr02: 60550176-60570988 Sorghum bicolor
Sobic.002G213400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 60560989-60570988 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184043 5267 Panicoideae View MSA
124582153 5269 Grass View MSA
122042192 5273 Angiosperm View MSA
121344572 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.265        
cufflinks 5.141       High
cufflinks 2.513       High
cufflinks 1.695        
cufflinks 0.422        
cufflinks 3.413       High
cufflinks 2.161        
cufflinks 1.975        
cufflinks 1.946        
cufflinks 1.278        
cufflinks 0.119       Low
cufflinks 0.324        
cufflinks 1.096        
cufflinks 0.227       Low
cufflinks 1.355        
cufflinks 3.654       High
cufflinks 2.778       High
cufflinks 2.025        
cufflinks 1.557        
cufflinks 4.551       High
cufflinks 0.699        
cufflinks 0.206       Low
cufflinks 0.233       Low
cufflinks 0.197       Low
cufflinks 1.298        
cufflinks 4.214       High
cufflinks 0.434        
cufflinks 1.033        
cufflinks 1.253        
cufflinks 1.03        

0 Strain