Gene : Sobic.002G187300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 Genomic Order:  1913
Name:  ? Sobic.002G187300 Secondary Identifier:  ? PAC:37953342
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G187300 0.5kb upstream 0.5kb upstream 4927 true Chr02: 57154207-57159133 Sorghum bicolor
Sobic.002G187300 0.5kb upstream 0.5kb upstream 500 false Chr02: 57158634-57159133 Sorghum bicolor
Sobic.002G187300 0.5kb downstream 0.5kb downstream 4927 true Chr02: 57153707-57158633 Sorghum bicolor
Sobic.002G187300 0.5kb downstream 0.5kb downstream 500 false Chr02: 57153707-57154206 Sorghum bicolor
Sobic.002G187300 1.0kb upstream 1.0kb upstream 5427 true Chr02: 57154207-57159633 Sorghum bicolor
Sobic.002G187300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57158634-57159633 Sorghum bicolor
Sobic.002G187300 1.0kb downstream 1.0kb downstream 5427 true Chr02: 57153207-57158633 Sorghum bicolor
Sobic.002G187300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57153207-57154206 Sorghum bicolor
Sobic.002G187300 2.0kb upstream 2.0kb upstream 6427 true Chr02: 57154207-57160633 Sorghum bicolor
Sobic.002G187300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57158634-57160633 Sorghum bicolor
Sobic.002G187300 2.0kb downstream 2.0kb downstream 6427 true Chr02: 57152207-57158633 Sorghum bicolor
Sobic.002G187300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57152207-57154206 Sorghum bicolor
Sobic.002G187300 5.0kb upstream 5.0kb upstream 9427 true Chr02: 57154207-57163633 Sorghum bicolor
Sobic.002G187300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57158634-57163633 Sorghum bicolor
Sobic.002G187300 5.0kb downstream 5.0kb downstream 9427 true Chr02: 57149207-57158633 Sorghum bicolor
Sobic.002G187300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57149207-57154206 Sorghum bicolor
Sobic.002G187300 10.0kb upstream 10.0kb upstream 14427 true Chr02: 57154207-57168633 Sorghum bicolor
Sobic.002G187300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57158634-57168633 Sorghum bicolor
Sobic.002G187300 10.0kb downstream 10.0kb downstream 14427 true Chr02: 57144207-57158633 Sorghum bicolor
Sobic.002G187300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57144207-57154206 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185990 5267 Panicoideae View MSA
124576361 5269 Grass View MSA
122048746 5273 Angiosperm View MSA
121311093 5274 Embryophyte View MSA
123348440 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.539       High
cufflinks 0.147       Low
cufflinks 0.13       Low
cufflinks 0.451        
cufflinks 0.311        
cufflinks 0.929       High
cufflinks 0.339        
cufflinks 0.227       Low
cufflinks 0.465        
cufflinks 0.491        
cufflinks 0.447        
cufflinks 0.62        
cufflinks 0.438        
cufflinks 0.474        
cufflinks 0.41        
cufflinks 0.229       Low
cufflinks 0.299        
cufflinks 0.261        
cufflinks 0.187       Low
cufflinks 0.396        
cufflinks 0.456        
cufflinks 0.63        
cufflinks 0.481        
cufflinks 0.445        
cufflinks 0.266        
cufflinks 0.115       Low
cufflinks 0.382        
cufflinks 0.926       High
cufflinks 0.363        
cufflinks 0.368        

0 Strain