Gene : Sobic.002G159900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11132//PTHR11132:SF120 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED Genomic Order:  1631
Name:  ? Sobic.002G159900 Secondary Identifier:  ? PAC:37954109
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G159900 0.5kb upstream 0.5kb upstream 10501 true Chr02: 49423486-49433986 Sorghum bicolor
Sobic.002G159900 0.5kb upstream 0.5kb upstream 500 false Chr02: 49433487-49433986 Sorghum bicolor
Sobic.002G159900 0.5kb downstream 0.5kb downstream 10501 true Chr02: 49422986-49433486 Sorghum bicolor
Sobic.002G159900 0.5kb downstream 0.5kb downstream 500 false Chr02: 49422986-49423485 Sorghum bicolor
Sobic.002G159900 1.0kb upstream 1.0kb upstream 11001 true Chr02: 49423486-49434486 Sorghum bicolor
Sobic.002G159900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49433487-49434486 Sorghum bicolor
Sobic.002G159900 1.0kb downstream 1.0kb downstream 11001 true Chr02: 49422486-49433486 Sorghum bicolor
Sobic.002G159900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49422486-49423485 Sorghum bicolor
Sobic.002G159900 2.0kb upstream 2.0kb upstream 12001 true Chr02: 49423486-49435486 Sorghum bicolor
Sobic.002G159900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49433487-49435486 Sorghum bicolor
Sobic.002G159900 2.0kb downstream 2.0kb downstream 12001 true Chr02: 49421486-49433486 Sorghum bicolor
Sobic.002G159900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49421486-49423485 Sorghum bicolor
Sobic.002G159900 5.0kb upstream 5.0kb upstream 15001 true Chr02: 49423486-49438486 Sorghum bicolor
Sobic.002G159900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49433487-49438486 Sorghum bicolor
Sobic.002G159900 5.0kb downstream 5.0kb downstream 15001 true Chr02: 49418486-49433486 Sorghum bicolor
Sobic.002G159900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49418486-49423485 Sorghum bicolor
Sobic.002G159900 10.0kb upstream 10.0kb upstream 20001 true Chr02: 49423486-49443486 Sorghum bicolor
Sobic.002G159900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49433487-49443486 Sorghum bicolor
Sobic.002G159900 10.0kb downstream 10.0kb downstream 20001 true Chr02: 49413486-49433486 Sorghum bicolor
Sobic.002G159900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49413486-49423485 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197021 5267 Panicoideae View MSA
124574618 5269 Grass View MSA
122048545 5273 Angiosperm View MSA
121348201 5274 Embryophyte View MSA
123427296 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.684     High  
cufflinks 0.703       Low
cufflinks 5.261        
cufflinks 10.28        
cufflinks 17.6     High  
cufflinks 9.524        
cufflinks 11.783     High  
cufflinks 2.308       Low
cufflinks 12.66     High  
cufflinks 11.354        
cufflinks 21.01     High  
cufflinks 20.147     High  
cufflinks 15.382     High  
cufflinks 18.271     High  
cufflinks 12.727     High  
cufflinks 2.794       Low
cufflinks 12.94     High  
cufflinks 12.583     High  
cufflinks 4.976        
cufflinks 13.602     High  
cufflinks 10.459        
cufflinks 29.048     High High
cufflinks 23.707     High  
cufflinks 23.97     High  
cufflinks 1.598       Low
cufflinks 0.576       Low
cufflinks 31.251     High High
cufflinks 2.382       Low
cufflinks 7.822        
cufflinks 19.158     High  

0 Strain