Gene : Sobic.006G128500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11362//PTHR11362:SF23 - PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1339
Name:  ? Sobic.006G128500 Secondary Identifier:  ? PAC:37948208
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G128500 0.5kb upstream 0.5kb upstream 3399 true Chr06: 49349449-49352847 Sorghum bicolor
Sobic.006G128500 0.5kb upstream 0.5kb upstream 500 false Chr06: 49349449-49349948 Sorghum bicolor
Sobic.006G128500 0.5kb downstream 0.5kb downstream 3399 true Chr06: 49349949-49353347 Sorghum bicolor
Sobic.006G128500 0.5kb downstream 0.5kb downstream 500 false Chr06: 49352848-49353347 Sorghum bicolor
Sobic.006G128500 1.0kb upstream 1.0kb upstream 3899 true Chr06: 49348949-49352847 Sorghum bicolor
Sobic.006G128500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49348949-49349948 Sorghum bicolor
Sobic.006G128500 1.0kb downstream 1.0kb downstream 3899 true Chr06: 49349949-49353847 Sorghum bicolor
Sobic.006G128500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49352848-49353847 Sorghum bicolor
Sobic.006G128500 2.0kb upstream 2.0kb upstream 4899 true Chr06: 49347949-49352847 Sorghum bicolor
Sobic.006G128500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49347949-49349948 Sorghum bicolor
Sobic.006G128500 2.0kb downstream 2.0kb downstream 4899 true Chr06: 49349949-49354847 Sorghum bicolor
Sobic.006G128500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49352848-49354847 Sorghum bicolor
Sobic.006G128500 5.0kb upstream 5.0kb upstream 7899 true Chr06: 49344949-49352847 Sorghum bicolor
Sobic.006G128500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49344949-49349948 Sorghum bicolor
Sobic.006G128500 5.0kb downstream 5.0kb downstream 7899 true Chr06: 49349949-49357847 Sorghum bicolor
Sobic.006G128500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49352848-49357847 Sorghum bicolor
Sobic.006G128500 10.0kb upstream 10.0kb upstream 12899 true Chr06: 49339949-49352847 Sorghum bicolor
Sobic.006G128500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49339949-49349948 Sorghum bicolor
Sobic.006G128500 10.0kb downstream 10.0kb downstream 12899 true Chr06: 49349949-49362847 Sorghum bicolor
Sobic.006G128500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49352848-49362847 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179644 5267 Panicoideae View MSA
124584846 5269 Grass View MSA
122044368 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121310284 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.033     Low  
cufflinks 0.021     Low  
cufflinks 0.011     Low Low
cufflinks 0.09        
cufflinks 0.007     Low Low
cufflinks 0.069     Low  
cufflinks 0.028     Low  
cufflinks 0.442       High
cufflinks 0.198       High
cufflinks 0.224       High
cufflinks 0.126        
cufflinks 0.02     Low  
cufflinks 0.034     Low  
cufflinks 0.103        
cufflinks 0.011     Low Low
cufflinks 0.146       High
cufflinks 0.039     Low  
cufflinks 0.035     Low  
cufflinks 0.165       High
cufflinks 0.087     Low  
cufflinks 0.047     Low  
cufflinks 0.05     Low  
cufflinks 0.045     Low  
cufflinks 0.011     Low Low
cufflinks 0.044        
cufflinks 0.023     Low  
cufflinks 0.101        
cufflinks 0.039     Low  
cufflinks 0.063     Low  

0 Strain