Gene : Sobic.002G280400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20863//PTHR20863:SF35 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2872
Name:  ? Sobic.002G280400 Secondary Identifier:  ? PAC:37955548
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G280400 0.5kb upstream 0.5kb upstream 3220 true Chr02: 66176461-66179680 Sorghum bicolor
Sobic.002G280400 0.5kb upstream 0.5kb upstream 500 false Chr02: 66179181-66179680 Sorghum bicolor
Sobic.002G280400 0.5kb downstream 0.5kb downstream 3220 true Chr02: 66175961-66179180 Sorghum bicolor
Sobic.002G280400 0.5kb downstream 0.5kb downstream 500 false Chr02: 66175961-66176460 Sorghum bicolor
Sobic.002G280400 1.0kb upstream 1.0kb upstream 3720 true Chr02: 66176461-66180180 Sorghum bicolor
Sobic.002G280400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 66179181-66180180 Sorghum bicolor
Sobic.002G280400 1.0kb downstream 1.0kb downstream 3720 true Chr02: 66175461-66179180 Sorghum bicolor
Sobic.002G280400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 66175461-66176460 Sorghum bicolor
Sobic.002G280400 2.0kb upstream 2.0kb upstream 4720 true Chr02: 66176461-66181180 Sorghum bicolor
Sobic.002G280400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 66179181-66181180 Sorghum bicolor
Sobic.002G280400 2.0kb downstream 2.0kb downstream 4720 true Chr02: 66174461-66179180 Sorghum bicolor
Sobic.002G280400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 66174461-66176460 Sorghum bicolor
Sobic.002G280400 5.0kb upstream 5.0kb upstream 7720 true Chr02: 66176461-66184180 Sorghum bicolor
Sobic.002G280400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 66179181-66184180 Sorghum bicolor
Sobic.002G280400 5.0kb downstream 5.0kb downstream 7720 true Chr02: 66171461-66179180 Sorghum bicolor
Sobic.002G280400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 66171461-66176460 Sorghum bicolor
Sobic.002G280400 10.0kb upstream 10.0kb upstream 12720 true Chr02: 66176461-66189180 Sorghum bicolor
Sobic.002G280400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 66179181-66189180 Sorghum bicolor
Sobic.002G280400 10.0kb downstream 10.0kb downstream 12720 true Chr02: 66166461-66179180 Sorghum bicolor
Sobic.002G280400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 66166461-66176460 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179742 5267 Panicoideae View MSA
124586574 5269 Grass View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 112.897     High High
cufflinks 7.057     High Low
cufflinks 18.951     High  
cufflinks 38.96     High  
cufflinks 36.276     High  
cufflinks 35.424     High  
cufflinks 46.508     High  
cufflinks 16.081     High Low
cufflinks 37.453     High  
cufflinks 36.605     High  
cufflinks 52.029     High  
cufflinks 60.952     High  
cufflinks 27.949     High  
cufflinks 62.469     High  
cufflinks 40.916     High  
cufflinks 12.454     High Low
cufflinks 52.007     High  
cufflinks 49.791     High  
cufflinks 16.497     High Low
cufflinks 36.405     High  
cufflinks 45.848     High  
cufflinks 72.166     High  
cufflinks 78.184     High High
cufflinks 71.489     High  
cufflinks 6.248       Low
cufflinks 4.626       Low
cufflinks 81.942     High High
cufflinks 16.489     High Low
cufflinks 50.205     High  
cufflinks 61.802     High  

0 Strain