Gene : Sobic.002G271100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10015//PTHR10015:SF194 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2776
Name:  ? Sobic.002G271100 Secondary Identifier:  ? PAC:37953647
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G271100 0.5kb upstream 0.5kb upstream 3959 true Chr02: 65466406-65470364 Sorghum bicolor
Sobic.002G271100 0.5kb upstream 0.5kb upstream 500 false Chr02: 65469865-65470364 Sorghum bicolor
Sobic.002G271100 0.5kb downstream 0.5kb downstream 3959 true Chr02: 65465906-65469864 Sorghum bicolor
Sobic.002G271100 0.5kb downstream 0.5kb downstream 500 false Chr02: 65465906-65466405 Sorghum bicolor
Sobic.002G271100 1.0kb upstream 1.0kb upstream 4459 true Chr02: 65466406-65470864 Sorghum bicolor
Sobic.002G271100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 65469865-65470864 Sorghum bicolor
Sobic.002G271100 1.0kb downstream 1.0kb downstream 4459 true Chr02: 65465406-65469864 Sorghum bicolor
Sobic.002G271100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 65465406-65466405 Sorghum bicolor
Sobic.002G271100 2.0kb upstream 2.0kb upstream 5459 true Chr02: 65466406-65471864 Sorghum bicolor
Sobic.002G271100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 65469865-65471864 Sorghum bicolor
Sobic.002G271100 2.0kb downstream 2.0kb downstream 5459 true Chr02: 65464406-65469864 Sorghum bicolor
Sobic.002G271100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 65464406-65466405 Sorghum bicolor
Sobic.002G271100 5.0kb upstream 5.0kb upstream 8459 true Chr02: 65466406-65474864 Sorghum bicolor
Sobic.002G271100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 65469865-65474864 Sorghum bicolor
Sobic.002G271100 5.0kb downstream 5.0kb downstream 8459 true Chr02: 65461406-65469864 Sorghum bicolor
Sobic.002G271100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 65461406-65466405 Sorghum bicolor
Sobic.002G271100 10.0kb upstream 10.0kb upstream 13459 true Chr02: 65466406-65479864 Sorghum bicolor
Sobic.002G271100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 65469865-65479864 Sorghum bicolor
Sobic.002G271100 10.0kb downstream 10.0kb downstream 13459 true Chr02: 65456406-65469864 Sorghum bicolor
Sobic.002G271100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 65456406-65466405 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178525 5267 Panicoideae View MSA
124583408 5269 Grass View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.374        
cufflinks 0.087       Low
cufflinks 1.119        
cufflinks 1.563       High
cufflinks 0.594        
cufflinks 0.402        
cufflinks 0.596        
cufflinks 0.49        
cufflinks 0.905        
cufflinks 0.623        
cufflinks 0.536        
cufflinks 0.857        
cufflinks 0.664        
cufflinks 0.963        
cufflinks 0.617        
cufflinks 0.627        
cufflinks 1.089        
cufflinks 0.531        
cufflinks 0.811        
cufflinks 1.91       High
cufflinks 0.322        
cufflinks 0.394        
cufflinks 0.548        
cufflinks 0.46        
cufflinks 0.897        
cufflinks 0.424        
cufflinks 0.744        
cufflinks 13.459     High High
cufflinks 0.191       Low
cufflinks 0.566        

0 Strain