Gene : Sobic.002G220900 S. bicolor v3.1.1
Genomic Order:  2260 Name:  ? Sobic.002G220900
Secondary Identifier:  ? PAC:37951834
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G220900 0.5kb upstream 0.5kb upstream 7732 true Chr02: 61262110-61269841 Sorghum bicolor
Sobic.002G220900 0.5kb upstream 0.5kb upstream 500 false Chr02: 61262110-61262609 Sorghum bicolor
Sobic.002G220900 0.5kb downstream 0.5kb downstream 7732 true Chr02: 61262610-61270341 Sorghum bicolor
Sobic.002G220900 0.5kb downstream 0.5kb downstream 500 false Chr02: 61269842-61270341 Sorghum bicolor
Sobic.002G220900 1.0kb upstream 1.0kb upstream 8232 true Chr02: 61261610-61269841 Sorghum bicolor
Sobic.002G220900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 61261610-61262609 Sorghum bicolor
Sobic.002G220900 1.0kb downstream 1.0kb downstream 8232 true Chr02: 61262610-61270841 Sorghum bicolor
Sobic.002G220900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 61269842-61270841 Sorghum bicolor
Sobic.002G220900 2.0kb upstream 2.0kb upstream 9232 true Chr02: 61260610-61269841 Sorghum bicolor
Sobic.002G220900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 61260610-61262609 Sorghum bicolor
Sobic.002G220900 2.0kb downstream 2.0kb downstream 9232 true Chr02: 61262610-61271841 Sorghum bicolor
Sobic.002G220900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 61269842-61271841 Sorghum bicolor
Sobic.002G220900 5.0kb upstream 5.0kb upstream 12232 true Chr02: 61257610-61269841 Sorghum bicolor
Sobic.002G220900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61257610-61262609 Sorghum bicolor
Sobic.002G220900 5.0kb downstream 5.0kb downstream 12232 true Chr02: 61262610-61274841 Sorghum bicolor
Sobic.002G220900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 61269842-61274841 Sorghum bicolor
Sobic.002G220900 10.0kb upstream 10.0kb upstream 17232 true Chr02: 61252610-61269841 Sorghum bicolor
Sobic.002G220900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 61252610-61262609 Sorghum bicolor
Sobic.002G220900 10.0kb downstream 10.0kb downstream 17232 true Chr02: 61262610-61279841 Sorghum bicolor
Sobic.002G220900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 61269842-61279841 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188984 5267 Panicoideae View MSA
124569369 5269 Grass View MSA
122047147 5273 Angiosperm View MSA
121345780 5274 Embryophyte View MSA
123424566 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.184       Low
cufflinks 15.28     High High
cufflinks 7.101        
cufflinks 3.812        
cufflinks 2.482        
cufflinks 9.808       High
cufflinks 4.764        
cufflinks 5.766        
cufflinks 2.124        
cufflinks 1.923        
cufflinks 0.405       Low
cufflinks 0.561        
cufflinks 2.754        
cufflinks 0.42       Low
cufflinks 4.485        
cufflinks 10.238     High High
cufflinks 3.923        
cufflinks 4.666        
cufflinks 7.98       High
cufflinks 3.368        
cufflinks 2.938        
cufflinks 0.541        
cufflinks 0.433       Low
cufflinks 0.416       Low
cufflinks 11.37     High High
cufflinks 11.785     High High
cufflinks 0.439       Low
cufflinks 0.032     Low Low
cufflinks 4.521        
cufflinks 3.588        

0 Strain