Gene : Sobic.002G224400 S. bicolor v3.1.1
Defline:  (1 of 11) PF00069//PF01453 - Protein kinase domain (Pkinase) // D-mannose binding lectin (B_lectin) Genomic Order:  2298
Name:  ? Sobic.002G224400 Secondary Identifier:  ? PAC:37952219
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G224400 0.5kb upstream 0.5kb upstream 3910 true Chr02: 61592871-61596780 Sorghum bicolor
Sobic.002G224400 0.5kb upstream 0.5kb upstream 500 false Chr02: 61592871-61593370 Sorghum bicolor
Sobic.002G224400 0.5kb downstream 0.5kb downstream 3910 true Chr02: 61593371-61597280 Sorghum bicolor
Sobic.002G224400 0.5kb downstream 0.5kb downstream 500 false Chr02: 61596781-61597280 Sorghum bicolor
Sobic.002G224400 1.0kb upstream 1.0kb upstream 4410 true Chr02: 61592371-61596780 Sorghum bicolor
Sobic.002G224400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 61592371-61593370 Sorghum bicolor
Sobic.002G224400 1.0kb downstream 1.0kb downstream 4410 true Chr02: 61593371-61597780 Sorghum bicolor
Sobic.002G224400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 61596781-61597780 Sorghum bicolor
Sobic.002G224400 2.0kb upstream 2.0kb upstream 5410 true Chr02: 61591371-61596780 Sorghum bicolor
Sobic.002G224400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 61591371-61593370 Sorghum bicolor
Sobic.002G224400 2.0kb downstream 2.0kb downstream 5410 true Chr02: 61593371-61598780 Sorghum bicolor
Sobic.002G224400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 61596781-61598780 Sorghum bicolor
Sobic.002G224400 5.0kb upstream 5.0kb upstream 8410 true Chr02: 61588371-61596780 Sorghum bicolor
Sobic.002G224400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61588371-61593370 Sorghum bicolor
Sobic.002G224400 5.0kb downstream 5.0kb downstream 8410 true Chr02: 61593371-61601780 Sorghum bicolor
Sobic.002G224400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 61596781-61601780 Sorghum bicolor
Sobic.002G224400 10.0kb upstream 10.0kb upstream 13410 true Chr02: 61583371-61596780 Sorghum bicolor
Sobic.002G224400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 61583371-61593370 Sorghum bicolor
Sobic.002G224400 10.0kb downstream 10.0kb downstream 13410 true Chr02: 61593371-61606780 Sorghum bicolor
Sobic.002G224400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 61596781-61606780 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192658 5267 Panicoideae View MSA
124583539 5269 Grass View MSA
122046776 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.624       High
cufflinks 0.018     Low  
cufflinks 0.355        
cufflinks 0.927        
cufflinks 0.102        
cufflinks 0.186        
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.012     Low Low
cufflinks 3.056       High
cufflinks 4.373       High
cufflinks 0.004     Low Low
cufflinks 2.378       High
cufflinks 0.075     Low  
cufflinks 0.048     Low  
cufflinks 0.012     Low Low
cufflinks 0.057     Low  
cufflinks 0.092     Low  
cufflinks 0.017     Low  
cufflinks 0.022     Low  
cufflinks 0.783        
cufflinks 2.699       High
cufflinks 2.337       High
cufflinks 0.088        
cufflinks 0.012     Low Low
cufflinks 1.464       High
cufflinks 1.098        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.181        

0 Strain