Gene : Sobic.006G159100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10641//PTHR10641:SF629 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  1662
Name:  ? Sobic.006G159100 Secondary Identifier:  ? PAC:37946187
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G159100 0.5kb upstream 0.5kb upstream 4534 true Chr06: 51761375-51765908 Sorghum bicolor
Sobic.006G159100 0.5kb upstream 0.5kb upstream 500 false Chr06: 51761375-51761874 Sorghum bicolor
Sobic.006G159100 0.5kb downstream 0.5kb downstream 4534 true Chr06: 51761875-51766408 Sorghum bicolor
Sobic.006G159100 0.5kb downstream 0.5kb downstream 500 false Chr06: 51765909-51766408 Sorghum bicolor
Sobic.006G159100 1.0kb upstream 1.0kb upstream 5034 true Chr06: 51760875-51765908 Sorghum bicolor
Sobic.006G159100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51760875-51761874 Sorghum bicolor
Sobic.006G159100 1.0kb downstream 1.0kb downstream 5034 true Chr06: 51761875-51766908 Sorghum bicolor
Sobic.006G159100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51765909-51766908 Sorghum bicolor
Sobic.006G159100 2.0kb upstream 2.0kb upstream 6034 true Chr06: 51759875-51765908 Sorghum bicolor
Sobic.006G159100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51759875-51761874 Sorghum bicolor
Sobic.006G159100 2.0kb downstream 2.0kb downstream 6034 true Chr06: 51761875-51767908 Sorghum bicolor
Sobic.006G159100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51765909-51767908 Sorghum bicolor
Sobic.006G159100 5.0kb upstream 5.0kb upstream 9034 true Chr06: 51756875-51765908 Sorghum bicolor
Sobic.006G159100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51756875-51761874 Sorghum bicolor
Sobic.006G159100 5.0kb downstream 5.0kb downstream 9034 true Chr06: 51761875-51770908 Sorghum bicolor
Sobic.006G159100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51765909-51770908 Sorghum bicolor
Sobic.006G159100 10.0kb upstream 10.0kb upstream 14034 true Chr06: 51751875-51765908 Sorghum bicolor
Sobic.006G159100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51751875-51761874 Sorghum bicolor
Sobic.006G159100 10.0kb downstream 10.0kb downstream 14034 true Chr06: 51761875-51775908 Sorghum bicolor
Sobic.006G159100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51765909-51775908 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191869 5267 Panicoideae View MSA
124583433 5269 Grass View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.576        
cufflinks 0.023     Low Low
cufflinks 0.173       Low
cufflinks 0.33        
cufflinks 3.215       High
cufflinks 0.167       Low
cufflinks 0.36        
cufflinks 0.307        
cufflinks 0.273        
cufflinks 0.338        
cufflinks 2.526        
cufflinks 2.918        
cufflinks 0.821        
cufflinks 2.065        
cufflinks 1.112        
cufflinks 0.06     Low Low
cufflinks 0.379        
cufflinks 0.253        
cufflinks 0.301        
cufflinks 0.488        
cufflinks 0.57        
cufflinks 1.702        
cufflinks 2.588        
cufflinks 2.733        
cufflinks 0.032     Low Low
cufflinks 0.04       Low
cufflinks 2.714        
cufflinks 1.039        
cufflinks 0.875        
cufflinks 2.404        

0 Strain