Gene : Sobic.002G219800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR28052:SF1 - UPF0545 PROTEIN C22ORF39 Genomic Order:  2249
Name:  ? Sobic.002G219800 Secondary Identifier:  ? PAC:37951107
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G219800 0.5kb upstream 0.5kb upstream 4436 true Chr02: 61118662-61123097 Sorghum bicolor
Sobic.002G219800 0.5kb upstream 0.5kb upstream 500 false Chr02: 61122598-61123097 Sorghum bicolor
Sobic.002G219800 0.5kb downstream 0.5kb downstream 4436 true Chr02: 61118162-61122597 Sorghum bicolor
Sobic.002G219800 0.5kb downstream 0.5kb downstream 500 false Chr02: 61118162-61118661 Sorghum bicolor
Sobic.002G219800 1.0kb upstream 1.0kb upstream 4936 true Chr02: 61118662-61123597 Sorghum bicolor
Sobic.002G219800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 61122598-61123597 Sorghum bicolor
Sobic.002G219800 1.0kb downstream 1.0kb downstream 4936 true Chr02: 61117662-61122597 Sorghum bicolor
Sobic.002G219800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 61117662-61118661 Sorghum bicolor
Sobic.002G219800 2.0kb upstream 2.0kb upstream 5936 true Chr02: 61118662-61124597 Sorghum bicolor
Sobic.002G219800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 61122598-61124597 Sorghum bicolor
Sobic.002G219800 2.0kb downstream 2.0kb downstream 5936 true Chr02: 61116662-61122597 Sorghum bicolor
Sobic.002G219800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 61116662-61118661 Sorghum bicolor
Sobic.002G219800 5.0kb upstream 5.0kb upstream 8936 true Chr02: 61118662-61127597 Sorghum bicolor
Sobic.002G219800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 61122598-61127597 Sorghum bicolor
Sobic.002G219800 5.0kb downstream 5.0kb downstream 8936 true Chr02: 61113662-61122597 Sorghum bicolor
Sobic.002G219800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 61113662-61118661 Sorghum bicolor
Sobic.002G219800 10.0kb upstream 10.0kb upstream 13936 true Chr02: 61118662-61132597 Sorghum bicolor
Sobic.002G219800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 61122598-61132597 Sorghum bicolor
Sobic.002G219800 10.0kb downstream 10.0kb downstream 13936 true Chr02: 61108662-61122597 Sorghum bicolor
Sobic.002G219800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 61108662-61118661 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192038 5267 Panicoideae View MSA
124570475 5269 Grass View MSA
122047882 5273 Angiosperm View MSA
121343967 5274 Embryophyte View MSA
123425812 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.17       High
cufflinks 0.211       Low
cufflinks 0.892        
cufflinks 1.541        
cufflinks 3.211        
cufflinks 2.49        
cufflinks 1.591        
cufflinks 0.318       Low
cufflinks 2.26        
cufflinks 2.058        
cufflinks 2.454        
cufflinks 1.537        
cufflinks 1.61        
cufflinks 2.083        
cufflinks 1.863        
cufflinks 0.814        
cufflinks 1.642        
cufflinks 1.59        
cufflinks 0.956        
cufflinks 1.59        
cufflinks 3.625       High
cufflinks 3.506       High
cufflinks 1.99        
cufflinks 2.353        
cufflinks 0.492       Low
cufflinks 0.206       Low
cufflinks 1.71        
cufflinks 2.225        
cufflinks 0.683       Low
cufflinks 1.929        

0 Strain