Gene : Sobic.002G352600 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  3608
Name:  ? Sobic.002G352600 Secondary Identifier:  ? PAC:37954608
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G352600 0.5kb upstream 0.5kb upstream 2892 true Chr02: 71585120-71588011 Sorghum bicolor
Sobic.002G352600 0.5kb upstream 0.5kb upstream 500 false Chr02: 71587512-71588011 Sorghum bicolor
Sobic.002G352600 0.5kb downstream 0.5kb downstream 2892 true Chr02: 71584620-71587511 Sorghum bicolor
Sobic.002G352600 0.5kb downstream 0.5kb downstream 500 false Chr02: 71584620-71585119 Sorghum bicolor
Sobic.002G352600 1.0kb upstream 1.0kb upstream 3392 true Chr02: 71585120-71588511 Sorghum bicolor
Sobic.002G352600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 71587512-71588511 Sorghum bicolor
Sobic.002G352600 1.0kb downstream 1.0kb downstream 3392 true Chr02: 71584120-71587511 Sorghum bicolor
Sobic.002G352600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 71584120-71585119 Sorghum bicolor
Sobic.002G352600 2.0kb upstream 2.0kb upstream 4392 true Chr02: 71585120-71589511 Sorghum bicolor
Sobic.002G352600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 71587512-71589511 Sorghum bicolor
Sobic.002G352600 2.0kb downstream 2.0kb downstream 4392 true Chr02: 71583120-71587511 Sorghum bicolor
Sobic.002G352600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 71583120-71585119 Sorghum bicolor
Sobic.002G352600 5.0kb upstream 5.0kb upstream 7392 true Chr02: 71585120-71592511 Sorghum bicolor
Sobic.002G352600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 71587512-71592511 Sorghum bicolor
Sobic.002G352600 5.0kb downstream 5.0kb downstream 7392 true Chr02: 71580120-71587511 Sorghum bicolor
Sobic.002G352600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 71580120-71585119 Sorghum bicolor
Sobic.002G352600 10.0kb upstream 10.0kb upstream 12392 true Chr02: 71585120-71597511 Sorghum bicolor
Sobic.002G352600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 71587512-71597511 Sorghum bicolor
Sobic.002G352600 10.0kb downstream 10.0kb downstream 12392 true Chr02: 71575120-71587511 Sorghum bicolor
Sobic.002G352600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 71575120-71585119 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175633 5267 Panicoideae View MSA
124585729 5269 Grass View MSA
122046334 5273 Angiosperm View MSA
121346218 5274 Embryophyte View MSA
123427523 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.759     High High
cufflinks 4.688       Low
cufflinks 7.449        
cufflinks 12.146       High
cufflinks 5.416        
cufflinks 9.086        
cufflinks 7.758        
cufflinks 3.899       Low
cufflinks 10.025       High
cufflinks 10.788       High
cufflinks 5.433        
cufflinks 8.36        
cufflinks 7.759        
cufflinks 6.046        
cufflinks 8.849        
cufflinks 9.73       High
cufflinks 9.005        
cufflinks 8.301        
cufflinks 3.912       Low
cufflinks 13.77     High High
cufflinks 10.136       High
cufflinks 6.237        
cufflinks 7.961        
cufflinks 6.737        
cufflinks 6.296        
cufflinks 3.88       Low
cufflinks 6.172        
cufflinks 12.65     High High
cufflinks 5.281        
cufflinks 8.701        

0 Strain