Gene : Sobic.006G093300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23115//PTHR23115:SF184 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL Genomic Order:  968
Name:  ? Sobic.006G093300 Secondary Identifier:  ? PAC:37948957
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G093300 0.5kb upstream 0.5kb upstream 6286 true Chr06: 46320497-46326782 Sorghum bicolor
Sobic.006G093300 0.5kb upstream 0.5kb upstream 500 false Chr06: 46320497-46320996 Sorghum bicolor
Sobic.006G093300 0.5kb downstream 0.5kb downstream 6286 true Chr06: 46320997-46327282 Sorghum bicolor
Sobic.006G093300 0.5kb downstream 0.5kb downstream 500 false Chr06: 46326783-46327282 Sorghum bicolor
Sobic.006G093300 1.0kb upstream 1.0kb upstream 6786 true Chr06: 46319997-46326782 Sorghum bicolor
Sobic.006G093300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46319997-46320996 Sorghum bicolor
Sobic.006G093300 1.0kb downstream 1.0kb downstream 6786 true Chr06: 46320997-46327782 Sorghum bicolor
Sobic.006G093300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46326783-46327782 Sorghum bicolor
Sobic.006G093300 2.0kb upstream 2.0kb upstream 7786 true Chr06: 46318997-46326782 Sorghum bicolor
Sobic.006G093300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46318997-46320996 Sorghum bicolor
Sobic.006G093300 2.0kb downstream 2.0kb downstream 7786 true Chr06: 46320997-46328782 Sorghum bicolor
Sobic.006G093300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46326783-46328782 Sorghum bicolor
Sobic.006G093300 5.0kb upstream 5.0kb upstream 10786 true Chr06: 46315997-46326782 Sorghum bicolor
Sobic.006G093300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46315997-46320996 Sorghum bicolor
Sobic.006G093300 5.0kb downstream 5.0kb downstream 10786 true Chr06: 46320997-46331782 Sorghum bicolor
Sobic.006G093300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46326783-46331782 Sorghum bicolor
Sobic.006G093300 10.0kb upstream 10.0kb upstream 15786 true Chr06: 46310997-46326782 Sorghum bicolor
Sobic.006G093300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46310997-46320996 Sorghum bicolor
Sobic.006G093300 10.0kb downstream 10.0kb downstream 15786 true Chr06: 46320997-46336782 Sorghum bicolor
Sobic.006G093300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46326783-46336782 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184540 5267 Panicoideae View MSA
124580827 5269 Grass View MSA
122043902 5273 Angiosperm View MSA
121344349 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.997       High
cufflinks 1.644       Low
cufflinks 2.517        
cufflinks 2.831        
cufflinks 4.705        
cufflinks 4.011        
cufflinks 3.357        
cufflinks 1.772       Low
cufflinks 4.519        
cufflinks 6.01       High
cufflinks 3.786        
cufflinks 5.165        
cufflinks 3.757        
cufflinks 5.5        
cufflinks 4.021        
cufflinks 1.689       Low
cufflinks 3.357        
cufflinks 3.498        
cufflinks 2.028       Low
cufflinks 3.577        
cufflinks 7.889       High
cufflinks 5.583        
cufflinks 5.361        
cufflinks 5.88       High
cufflinks 2.03       Low
cufflinks 2.031       Low
cufflinks 3.651        
cufflinks 1.554       Low
cufflinks 4.079        
cufflinks 5.685        

0 Strain