Gene : Sobic.006G106200 S. bicolor v3.1.1
Defline:  (1 of 2) K11290 - template-activating factor I (SET, TAF1, I2PP2A) Genomic Order:  1102
Name:  ? Sobic.006G106200 Secondary Identifier:  ? PAC:37946409
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G106200 0.5kb upstream 0.5kb upstream 4573 true Chr06: 47610470-47615042 Sorghum bicolor
Sobic.006G106200 0.5kb upstream 0.5kb upstream 500 false Chr06: 47614543-47615042 Sorghum bicolor
Sobic.006G106200 0.5kb downstream 0.5kb downstream 4573 true Chr06: 47609970-47614542 Sorghum bicolor
Sobic.006G106200 0.5kb downstream 0.5kb downstream 500 false Chr06: 47609970-47610469 Sorghum bicolor
Sobic.006G106200 1.0kb upstream 1.0kb upstream 5073 true Chr06: 47610470-47615542 Sorghum bicolor
Sobic.006G106200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47614543-47615542 Sorghum bicolor
Sobic.006G106200 1.0kb downstream 1.0kb downstream 5073 true Chr06: 47609470-47614542 Sorghum bicolor
Sobic.006G106200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47609470-47610469 Sorghum bicolor
Sobic.006G106200 2.0kb upstream 2.0kb upstream 6073 true Chr06: 47610470-47616542 Sorghum bicolor
Sobic.006G106200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47614543-47616542 Sorghum bicolor
Sobic.006G106200 2.0kb downstream 2.0kb downstream 6073 true Chr06: 47608470-47614542 Sorghum bicolor
Sobic.006G106200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47608470-47610469 Sorghum bicolor
Sobic.006G106200 5.0kb upstream 5.0kb upstream 9073 true Chr06: 47610470-47619542 Sorghum bicolor
Sobic.006G106200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47614543-47619542 Sorghum bicolor
Sobic.006G106200 5.0kb downstream 5.0kb downstream 9073 true Chr06: 47605470-47614542 Sorghum bicolor
Sobic.006G106200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47605470-47610469 Sorghum bicolor
Sobic.006G106200 10.0kb upstream 10.0kb upstream 14073 true Chr06: 47610470-47624542 Sorghum bicolor
Sobic.006G106200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47614543-47624542 Sorghum bicolor
Sobic.006G106200 10.0kb downstream 10.0kb downstream 14073 true Chr06: 47600470-47614542 Sorghum bicolor
Sobic.006G106200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47600470-47610469 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192433 5267 Panicoideae View MSA
124589362 5269 Grass View MSA
122049668 5273 Angiosperm View MSA
121348262 5274 Embryophyte View MSA
123426622 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.943        
cufflinks 0.381       Low
cufflinks 2.305        
cufflinks 4.834        
cufflinks 10.787        
cufflinks 6.823        
cufflinks 7.261        
cufflinks 0.915       Low
cufflinks 8.908        
cufflinks 10.444        
cufflinks 4.797        
cufflinks 5.711        
cufflinks 7.697        
cufflinks 5.884        
cufflinks 10.175        
cufflinks 1.451       Low
cufflinks 7.919        
cufflinks 8.174        
cufflinks 1.705       Low
cufflinks 8.611        
cufflinks 30.159     High High
cufflinks 7.356        
cufflinks 7.19        
cufflinks 6.828        
cufflinks 0.759       Low
cufflinks 0.202       Low
cufflinks 5.175        
cufflinks 8.737        
cufflinks 4.512        
cufflinks 15.997     High High

0 Strain