Gene : Sobic.002G324100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31062:SF1 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED Genomic Order:  3320
Name:  ? Sobic.002G324100 Secondary Identifier:  ? PAC:37955123
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G324100 0.5kb upstream 0.5kb upstream 3977 true Chr02: 69495572-69499548 Sorghum bicolor
Sobic.002G324100 0.5kb upstream 0.5kb upstream 500 false Chr02: 69495572-69496071 Sorghum bicolor
Sobic.002G324100 0.5kb downstream 0.5kb downstream 3977 true Chr02: 69496072-69500048 Sorghum bicolor
Sobic.002G324100 0.5kb downstream 0.5kb downstream 500 false Chr02: 69499549-69500048 Sorghum bicolor
Sobic.002G324100 1.0kb upstream 1.0kb upstream 4477 true Chr02: 69495072-69499548 Sorghum bicolor
Sobic.002G324100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69495072-69496071 Sorghum bicolor
Sobic.002G324100 1.0kb downstream 1.0kb downstream 4477 true Chr02: 69496072-69500548 Sorghum bicolor
Sobic.002G324100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 69499549-69500548 Sorghum bicolor
Sobic.002G324100 2.0kb upstream 2.0kb upstream 5477 true Chr02: 69494072-69499548 Sorghum bicolor
Sobic.002G324100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69494072-69496071 Sorghum bicolor
Sobic.002G324100 2.0kb downstream 2.0kb downstream 5477 true Chr02: 69496072-69501548 Sorghum bicolor
Sobic.002G324100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 69499549-69501548 Sorghum bicolor
Sobic.002G324100 5.0kb upstream 5.0kb upstream 8477 true Chr02: 69491072-69499548 Sorghum bicolor
Sobic.002G324100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69491072-69496071 Sorghum bicolor
Sobic.002G324100 5.0kb downstream 5.0kb downstream 8477 true Chr02: 69496072-69504548 Sorghum bicolor
Sobic.002G324100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 69499549-69504548 Sorghum bicolor
Sobic.002G324100 10.0kb upstream 10.0kb upstream 13477 true Chr02: 69486072-69499548 Sorghum bicolor
Sobic.002G324100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69486072-69496071 Sorghum bicolor
Sobic.002G324100 10.0kb downstream 10.0kb downstream 13477 true Chr02: 69496072-69509548 Sorghum bicolor
Sobic.002G324100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 69499549-69509548 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189563 5267 Panicoideae View MSA
124577913 5269 Grass View MSA
122047013 5273 Angiosperm View MSA
121352157 5274 Embryophyte View MSA
123382575 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.959       High
cufflinks 0.245       Low
cufflinks 0.179       Low
cufflinks 0.161       Low
cufflinks 3.329       High
cufflinks 0.528        
cufflinks 0.399        
cufflinks 0.633        
cufflinks 0.244       Low
cufflinks 0.261        
cufflinks 1.486       High
cufflinks 0.509        
cufflinks 0.415        
cufflinks 1.146        
cufflinks 0.272        
cufflinks 0.237       Low
cufflinks 0.349        
cufflinks 0.307        
cufflinks 0.482        
cufflinks 0.293        
cufflinks 1.092        
cufflinks 2.384       High
cufflinks 0.732        
cufflinks 0.798        
cufflinks 0.205       Low
cufflinks 0.59        
cufflinks 0.264        
cufflinks 0.181       Low
cufflinks 0.208       Low
cufflinks 0.312        

0 Strain