Gene : Sobic.002G317300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Genomic Order:  3251
Name:  ? Sobic.002G317300 Secondary Identifier:  ? PAC:37955622
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G317300 0.5kb upstream 0.5kb upstream 4693 true Chr02: 68999441-69004133 Sorghum bicolor
Sobic.002G317300 0.5kb upstream 0.5kb upstream 500 false Chr02: 69003634-69004133 Sorghum bicolor
Sobic.002G317300 0.5kb downstream 0.5kb downstream 4693 true Chr02: 68998941-69003633 Sorghum bicolor
Sobic.002G317300 0.5kb downstream 0.5kb downstream 500 false Chr02: 68998941-68999440 Sorghum bicolor
Sobic.002G317300 1.0kb upstream 1.0kb upstream 5193 true Chr02: 68999441-69004633 Sorghum bicolor
Sobic.002G317300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 69003634-69004633 Sorghum bicolor
Sobic.002G317300 1.0kb downstream 1.0kb downstream 5193 true Chr02: 68998441-69003633 Sorghum bicolor
Sobic.002G317300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 68998441-68999440 Sorghum bicolor
Sobic.002G317300 2.0kb upstream 2.0kb upstream 6193 true Chr02: 68999441-69005633 Sorghum bicolor
Sobic.002G317300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 69003634-69005633 Sorghum bicolor
Sobic.002G317300 2.0kb downstream 2.0kb downstream 6193 true Chr02: 68997441-69003633 Sorghum bicolor
Sobic.002G317300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 68997441-68999440 Sorghum bicolor
Sobic.002G317300 5.0kb upstream 5.0kb upstream 9193 true Chr02: 68999441-69008633 Sorghum bicolor
Sobic.002G317300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 69003634-69008633 Sorghum bicolor
Sobic.002G317300 5.0kb downstream 5.0kb downstream 9193 true Chr02: 68994441-69003633 Sorghum bicolor
Sobic.002G317300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 68994441-68999440 Sorghum bicolor
Sobic.002G317300 10.0kb upstream 10.0kb upstream 14193 true Chr02: 68999441-69013633 Sorghum bicolor
Sobic.002G317300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 69003634-69013633 Sorghum bicolor
Sobic.002G317300 10.0kb downstream 10.0kb downstream 14193 true Chr02: 68989441-69003633 Sorghum bicolor
Sobic.002G317300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 68989441-68999440 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190978 5267 Panicoideae View MSA
124578780 5269 Grass View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.61     High  
cufflinks 3.563       Low
cufflinks 9.404       Low
cufflinks 27.52     High  
cufflinks 32.74     High  
cufflinks 10.38       Low
cufflinks 19.201     High  
cufflinks 13.854     High  
cufflinks 27.678     High  
cufflinks 24.99     High  
cufflinks 30.969     High  
cufflinks 29.565     High  
cufflinks 21.86     High  
cufflinks 30.145     High  
cufflinks 17.603     High  
cufflinks 10.803     High Low
cufflinks 20.436     High  
cufflinks 21.735     High  
cufflinks 12.208     High  
cufflinks 24.433     High  
cufflinks 21.439     High  
cufflinks 33.089     High  
cufflinks 31.523     High  
cufflinks 33.109     High  
cufflinks 6.152       Low
cufflinks 5.977       Low
cufflinks 25.62     High  
cufflinks 7.643       Low
cufflinks 23.65     High  
cufflinks 16.481     High  

0 Strain