Gene : Sobic.002G308700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10799//PTHR10799:SF625 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3164
Name:  ? Sobic.002G308700 Secondary Identifier:  ? PAC:37950366
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G308700 0.5kb upstream 0.5kb upstream 12536 true Chr02: 68304957-68317492 Sorghum bicolor
Sobic.002G308700 0.5kb upstream 0.5kb upstream 500 false Chr02: 68304957-68305456 Sorghum bicolor
Sobic.002G308700 0.5kb downstream 0.5kb downstream 12536 true Chr02: 68305457-68317992 Sorghum bicolor
Sobic.002G308700 0.5kb downstream 0.5kb downstream 500 false Chr02: 68317493-68317992 Sorghum bicolor
Sobic.002G308700 1.0kb upstream 1.0kb upstream 13036 true Chr02: 68304457-68317492 Sorghum bicolor
Sobic.002G308700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 68304457-68305456 Sorghum bicolor
Sobic.002G308700 1.0kb downstream 1.0kb downstream 13036 true Chr02: 68305457-68318492 Sorghum bicolor
Sobic.002G308700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 68317493-68318492 Sorghum bicolor
Sobic.002G308700 2.0kb upstream 2.0kb upstream 14036 true Chr02: 68303457-68317492 Sorghum bicolor
Sobic.002G308700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 68303457-68305456 Sorghum bicolor
Sobic.002G308700 2.0kb downstream 2.0kb downstream 14036 true Chr02: 68305457-68319492 Sorghum bicolor
Sobic.002G308700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 68317493-68319492 Sorghum bicolor
Sobic.002G308700 5.0kb upstream 5.0kb upstream 17036 true Chr02: 68300457-68317492 Sorghum bicolor
Sobic.002G308700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 68300457-68305456 Sorghum bicolor
Sobic.002G308700 5.0kb downstream 5.0kb downstream 17036 true Chr02: 68305457-68322492 Sorghum bicolor
Sobic.002G308700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 68317493-68322492 Sorghum bicolor
Sobic.002G308700 10.0kb upstream 10.0kb upstream 22036 true Chr02: 68295457-68317492 Sorghum bicolor
Sobic.002G308700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 68295457-68305456 Sorghum bicolor
Sobic.002G308700 10.0kb downstream 10.0kb downstream 22036 true Chr02: 68305457-68327492 Sorghum bicolor
Sobic.002G308700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 68317493-68327492 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191355 5267 Panicoideae View MSA
124582511 5269 Grass View MSA
122042077 5273 Angiosperm View MSA
121346690 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.118       Low
cufflinks 8.301     High Low
cufflinks 11.492     High  
cufflinks 7.702       Low
cufflinks 29.41     High High
cufflinks 13.723     High  
cufflinks 16.951     High  
cufflinks 8.385       Low
cufflinks 17.336     High  
cufflinks 15.544     High  
cufflinks 16.674     High  
cufflinks 23.964     High High
cufflinks 20.952     High  
cufflinks 16.918     High  
cufflinks 21.841     High  
cufflinks 9.811     High Low
cufflinks 15.168     High  
cufflinks 16.233     High  
cufflinks 16.36     High  
cufflinks 16.793     High  
cufflinks 42.257     High High
cufflinks 13.377     High  
cufflinks 17.888     High  
cufflinks 17.228     High  
cufflinks 13.322     High  
cufflinks 8.955     High Low
cufflinks 19.489     High  
cufflinks 4.515       Low
cufflinks 13.622     High  
cufflinks 22.862     High  

0 Strain