Gene : Sobic.006G124400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  1292
Name:  ? Sobic.006G124400 Secondary Identifier:  ? PAC:37945387
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G124400 0.5kb upstream 0.5kb upstream 6976 true Chr06: 49008265-49015240 Sorghum bicolor
Sobic.006G124400 0.5kb upstream 0.5kb upstream 500 false Chr06: 49008265-49008764 Sorghum bicolor
Sobic.006G124400 0.5kb downstream 0.5kb downstream 6976 true Chr06: 49008765-49015740 Sorghum bicolor
Sobic.006G124400 0.5kb downstream 0.5kb downstream 500 false Chr06: 49015241-49015740 Sorghum bicolor
Sobic.006G124400 1.0kb upstream 1.0kb upstream 7476 true Chr06: 49007765-49015240 Sorghum bicolor
Sobic.006G124400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49007765-49008764 Sorghum bicolor
Sobic.006G124400 1.0kb downstream 1.0kb downstream 7476 true Chr06: 49008765-49016240 Sorghum bicolor
Sobic.006G124400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49015241-49016240 Sorghum bicolor
Sobic.006G124400 2.0kb upstream 2.0kb upstream 8476 true Chr06: 49006765-49015240 Sorghum bicolor
Sobic.006G124400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49006765-49008764 Sorghum bicolor
Sobic.006G124400 2.0kb downstream 2.0kb downstream 8476 true Chr06: 49008765-49017240 Sorghum bicolor
Sobic.006G124400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49015241-49017240 Sorghum bicolor
Sobic.006G124400 5.0kb upstream 5.0kb upstream 11476 true Chr06: 49003765-49015240 Sorghum bicolor
Sobic.006G124400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49003765-49008764 Sorghum bicolor
Sobic.006G124400 5.0kb downstream 5.0kb downstream 11476 true Chr06: 49008765-49020240 Sorghum bicolor
Sobic.006G124400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49015241-49020240 Sorghum bicolor
Sobic.006G124400 10.0kb upstream 10.0kb upstream 16476 true Chr06: 48998765-49015240 Sorghum bicolor
Sobic.006G124400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48998765-49008764 Sorghum bicolor
Sobic.006G124400 10.0kb downstream 10.0kb downstream 16476 true Chr06: 49008765-49025240 Sorghum bicolor
Sobic.006G124400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49015241-49025240 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176590 5267 Panicoideae View MSA
124586161 5269 Grass View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.991        
cufflinks 0.015     Low Low
cufflinks 0.008     Low Low
cufflinks 0.012     Low Low
cufflinks 4.45        
cufflinks 0.024     Low Low
cufflinks 3.294        
cufflinks 0.183        
cufflinks 0.12        
cufflinks 0.573        
cufflinks 4.335        
cufflinks 4.374        
cufflinks 0.321        
cufflinks 2.808        
cufflinks 1.96        
cufflinks 0.018     Low Low
cufflinks 2.874        
cufflinks 3.207        
cufflinks 0.023     Low Low
cufflinks 2.776        
cufflinks 10.597       High
cufflinks 6.282        
cufflinks 4.913        
cufflinks 6.274        
cufflinks 0.003     Low Low
cufflinks 0.011     Low Low
cufflinks 0.611        
cufflinks 0.046     Low Low
cufflinks 0.573        
cufflinks 2.653        

0 Strain