Gene : Sobic.002G298300 S. bicolor v3.1.1
Defline:  (1 of 1) K12161 - ubiquitin related modifier 1 (URM1) Genomic Order:  3058
Name:  ? Sobic.002G298300 Secondary Identifier:  ? PAC:37950334
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G298300 0.5kb upstream 0.5kb upstream 3073 true Chr02: 67421172-67424244 Sorghum bicolor
Sobic.002G298300 0.5kb upstream 0.5kb upstream 500 false Chr02: 67421172-67421671 Sorghum bicolor
Sobic.002G298300 0.5kb downstream 0.5kb downstream 3073 true Chr02: 67421672-67424744 Sorghum bicolor
Sobic.002G298300 0.5kb downstream 0.5kb downstream 500 false Chr02: 67424245-67424744 Sorghum bicolor
Sobic.002G298300 1.0kb upstream 1.0kb upstream 3573 true Chr02: 67420672-67424244 Sorghum bicolor
Sobic.002G298300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 67420672-67421671 Sorghum bicolor
Sobic.002G298300 1.0kb downstream 1.0kb downstream 3573 true Chr02: 67421672-67425244 Sorghum bicolor
Sobic.002G298300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 67424245-67425244 Sorghum bicolor
Sobic.002G298300 2.0kb upstream 2.0kb upstream 4573 true Chr02: 67419672-67424244 Sorghum bicolor
Sobic.002G298300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 67419672-67421671 Sorghum bicolor
Sobic.002G298300 2.0kb downstream 2.0kb downstream 4573 true Chr02: 67421672-67426244 Sorghum bicolor
Sobic.002G298300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 67424245-67426244 Sorghum bicolor
Sobic.002G298300 5.0kb upstream 5.0kb upstream 7573 true Chr02: 67416672-67424244 Sorghum bicolor
Sobic.002G298300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 67416672-67421671 Sorghum bicolor
Sobic.002G298300 5.0kb downstream 5.0kb downstream 7573 true Chr02: 67421672-67429244 Sorghum bicolor
Sobic.002G298300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 67424245-67429244 Sorghum bicolor
Sobic.002G298300 10.0kb upstream 10.0kb upstream 12573 true Chr02: 67411672-67424244 Sorghum bicolor
Sobic.002G298300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 67411672-67421671 Sorghum bicolor
Sobic.002G298300 10.0kb downstream 10.0kb downstream 12573 true Chr02: 67421672-67434244 Sorghum bicolor
Sobic.002G298300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 67424245-67434244 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176767 5267 Panicoideae View MSA
124578759 5269 Grass View MSA
122042702 5273 Angiosperm View MSA
121349915 5274 Embryophyte View MSA
123424285 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.152     High High
cufflinks 1.309       Low
cufflinks 3.544        
cufflinks 7.216       High
cufflinks 3.956        
cufflinks 6.376        
cufflinks 3.737        
cufflinks 1.687       Low
cufflinks 6.097        
cufflinks 7.634       High
cufflinks 4.067        
cufflinks 5.267        
cufflinks 4.491        
cufflinks 5.735        
cufflinks 4.296        
cufflinks 3.278        
cufflinks 4.013        
cufflinks 4.297        
cufflinks 2.072       Low
cufflinks 4.675        
cufflinks 4.672        
cufflinks 6.292        
cufflinks 6.153        
cufflinks 6.341        
cufflinks 1.755       Low
cufflinks 1.205       Low
cufflinks 4.86        
cufflinks 7.057        
cufflinks 3.719        
cufflinks 5.527        

0 Strain