Gene : Sobic.002G291400 S. bicolor v3.1.1
Defline:  (1 of 1) 2.4.2.19 - Nicotinate-nucleotide diphosphorylase (carboxylating) / Quinolinate phosphoribosyltransferase (decarboxylating) Genomic Order:  2988
Name:  ? Sobic.002G291400 Secondary Identifier:  ? PAC:37954210
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5653 Sorghum bicolor pathologic  
Sbicolor PYRIDNUCSYN-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G291400 0.5kb upstream 0.5kb upstream 5174 true Chr02: 66966941-66972114 Sorghum bicolor
Sobic.002G291400 0.5kb upstream 0.5kb upstream 500 false Chr02: 66966941-66967440 Sorghum bicolor
Sobic.002G291400 0.5kb downstream 0.5kb downstream 5174 true Chr02: 66967441-66972614 Sorghum bicolor
Sobic.002G291400 0.5kb downstream 0.5kb downstream 500 false Chr02: 66972115-66972614 Sorghum bicolor
Sobic.002G291400 1.0kb upstream 1.0kb upstream 5674 true Chr02: 66966441-66972114 Sorghum bicolor
Sobic.002G291400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 66966441-66967440 Sorghum bicolor
Sobic.002G291400 1.0kb downstream 1.0kb downstream 5674 true Chr02: 66967441-66973114 Sorghum bicolor
Sobic.002G291400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 66972115-66973114 Sorghum bicolor
Sobic.002G291400 2.0kb upstream 2.0kb upstream 6674 true Chr02: 66965441-66972114 Sorghum bicolor
Sobic.002G291400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 66965441-66967440 Sorghum bicolor
Sobic.002G291400 2.0kb downstream 2.0kb downstream 6674 true Chr02: 66967441-66974114 Sorghum bicolor
Sobic.002G291400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 66972115-66974114 Sorghum bicolor
Sobic.002G291400 5.0kb upstream 5.0kb upstream 9674 true Chr02: 66962441-66972114 Sorghum bicolor
Sobic.002G291400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 66962441-66967440 Sorghum bicolor
Sobic.002G291400 5.0kb downstream 5.0kb downstream 9674 true Chr02: 66967441-66977114 Sorghum bicolor
Sobic.002G291400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 66972115-66977114 Sorghum bicolor
Sobic.002G291400 10.0kb upstream 10.0kb upstream 14674 true Chr02: 66957441-66972114 Sorghum bicolor
Sobic.002G291400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 66957441-66967440 Sorghum bicolor
Sobic.002G291400 10.0kb downstream 10.0kb downstream 14674 true Chr02: 66967441-66982114 Sorghum bicolor
Sobic.002G291400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 66972115-66982114 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026837 5273 Angiosperm View MSA
122182567 5267 Panicoideae View MSA
124575538 5269 Grass View MSA
121346230 5274 Embryophyte View MSA
123424244 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.301        
cufflinks 6.052        
cufflinks 3.593       Low
cufflinks 5.296        
cufflinks 8.393       High
cufflinks 6.993        
cufflinks 3.816       Low
cufflinks 5.228        
cufflinks 6.855        
cufflinks 9.078       High
cufflinks 4.868        
cufflinks 4.757        
cufflinks 7.499       High
cufflinks 6.546        
cufflinks 7.48       High
cufflinks 5.863        
cufflinks 3.94       Low
cufflinks 4.21       Low
cufflinks 4.586        
cufflinks 3.778       Low
cufflinks 6.603        
cufflinks 6.41        
cufflinks 5.256        
cufflinks 5.393        
cufflinks 4.496        
cufflinks 7.617     High High
cufflinks 4.87        
cufflinks 2.578       Low
cufflinks 5.067        
cufflinks 7.75       High

0 Strain