Gene : Sobic.002G410700 S. bicolor v3.1.1
Defline:  (1 of 2) K02151 - V-type H+-transporting ATPase subunit F (ATPeV1F, ATP6S14) Genomic Order:  4204
Name:  ? Sobic.002G410700 Secondary Identifier:  ? PAC:37952089
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7219 Sorghum bicolor pathologic  
Sbicolor PWY-7229 Sorghum bicolor pathologic  
Sbicolor PWY-841 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G410700 0.5kb upstream 0.5kb upstream 4814 true Chr02: 75899648-75904461 Sorghum bicolor
Sobic.002G410700 0.5kb upstream 0.5kb upstream 500 false Chr02: 75899648-75900147 Sorghum bicolor
Sobic.002G410700 0.5kb downstream 0.5kb downstream 4814 true Chr02: 75900148-75904961 Sorghum bicolor
Sobic.002G410700 0.5kb downstream 0.5kb downstream 500 false Chr02: 75904462-75904961 Sorghum bicolor
Sobic.002G410700 1.0kb upstream 1.0kb upstream 5314 true Chr02: 75899148-75904461 Sorghum bicolor
Sobic.002G410700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 75899148-75900147 Sorghum bicolor
Sobic.002G410700 1.0kb downstream 1.0kb downstream 5314 true Chr02: 75900148-75905461 Sorghum bicolor
Sobic.002G410700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 75904462-75905461 Sorghum bicolor
Sobic.002G410700 2.0kb upstream 2.0kb upstream 6314 true Chr02: 75898148-75904461 Sorghum bicolor
Sobic.002G410700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 75898148-75900147 Sorghum bicolor
Sobic.002G410700 2.0kb downstream 2.0kb downstream 6314 true Chr02: 75900148-75906461 Sorghum bicolor
Sobic.002G410700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 75904462-75906461 Sorghum bicolor
Sobic.002G410700 5.0kb upstream 5.0kb upstream 9314 true Chr02: 75895148-75904461 Sorghum bicolor
Sobic.002G410700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 75895148-75900147 Sorghum bicolor
Sobic.002G410700 5.0kb downstream 5.0kb downstream 9314 true Chr02: 75900148-75909461 Sorghum bicolor
Sobic.002G410700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 75904462-75909461 Sorghum bicolor
Sobic.002G410700 10.0kb upstream 10.0kb upstream 14314 true Chr02: 75890148-75904461 Sorghum bicolor
Sobic.002G410700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 75890148-75900147 Sorghum bicolor
Sobic.002G410700 10.0kb downstream 10.0kb downstream 14314 true Chr02: 75900148-75914461 Sorghum bicolor
Sobic.002G410700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 75904462-75914461 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185361 5267 Panicoideae View MSA
124583710 5269 Grass View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.496     High  
cufflinks 6.399     High Low
cufflinks 9.463        
cufflinks 12.461     High  
cufflinks 12.699     High  
cufflinks 9.347        
cufflinks 12.676     High  
cufflinks 9.049     High  
cufflinks 12.071        
cufflinks 13.404     High  
cufflinks 14.291     High  
cufflinks 13.322     High  
cufflinks 8.565       Low
cufflinks 17.623     High High
cufflinks 11.848        
cufflinks 11.754     High  
cufflinks 16.216     High  
cufflinks 16.29     High  
cufflinks 9.224        
cufflinks 17.92     High High
cufflinks 6.712       Low
cufflinks 20.593     High High
cufflinks 19.128     High High
cufflinks 18.386     High High
cufflinks 5.952       Low
cufflinks 6.442     High Low
cufflinks 11.526     High  
cufflinks 10.599     High  
cufflinks 12.356     High  
cufflinks 11.378        

0 Strain