Gene : Sobic.006G198600 S. bicolor v3.1.1
Defline:  (1 of 1) K14555 - U3 small nucleolar RNA-associated protein 13 (UTP13, TBL3) Genomic Order:  2068
Name:  ? Sobic.006G198600 Secondary Identifier:  ? PAC:37947062
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G198600 0.5kb upstream 0.5kb upstream 6790 true Chr06: 55090190-55096979 Sorghum bicolor
Sobic.006G198600 0.5kb upstream 0.5kb upstream 500 false Chr06: 55096480-55096979 Sorghum bicolor
Sobic.006G198600 0.5kb downstream 0.5kb downstream 6790 true Chr06: 55089690-55096479 Sorghum bicolor
Sobic.006G198600 0.5kb downstream 0.5kb downstream 500 false Chr06: 55089690-55090189 Sorghum bicolor
Sobic.006G198600 1.0kb upstream 1.0kb upstream 7290 true Chr06: 55090190-55097479 Sorghum bicolor
Sobic.006G198600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55096480-55097479 Sorghum bicolor
Sobic.006G198600 1.0kb downstream 1.0kb downstream 7290 true Chr06: 55089190-55096479 Sorghum bicolor
Sobic.006G198600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55089190-55090189 Sorghum bicolor
Sobic.006G198600 2.0kb upstream 2.0kb upstream 8290 true Chr06: 55090190-55098479 Sorghum bicolor
Sobic.006G198600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55096480-55098479 Sorghum bicolor
Sobic.006G198600 2.0kb downstream 2.0kb downstream 8290 true Chr06: 55088190-55096479 Sorghum bicolor
Sobic.006G198600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55088190-55090189 Sorghum bicolor
Sobic.006G198600 5.0kb upstream 5.0kb upstream 11290 true Chr06: 55090190-55101479 Sorghum bicolor
Sobic.006G198600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55096480-55101479 Sorghum bicolor
Sobic.006G198600 5.0kb downstream 5.0kb downstream 11290 true Chr06: 55085190-55096479 Sorghum bicolor
Sobic.006G198600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55085190-55090189 Sorghum bicolor
Sobic.006G198600 10.0kb upstream 10.0kb upstream 16290 true Chr06: 55090190-55106479 Sorghum bicolor
Sobic.006G198600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55096480-55106479 Sorghum bicolor
Sobic.006G198600 10.0kb downstream 10.0kb downstream 16290 true Chr06: 55080190-55096479 Sorghum bicolor
Sobic.006G198600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 55080190-55090189 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041178 5273 Angiosperm View MSA
122195092 5267 Panicoideae View MSA
124578593 5269 Grass View MSA
121349403 5274 Embryophyte View MSA
123428044 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.367       High
cufflinks 0.083       Low
cufflinks 0.489       Low
cufflinks 1.954        
cufflinks 6.076        
cufflinks 1.176        
cufflinks 2.872        
cufflinks 0.218       Low
cufflinks 4.652        
cufflinks 4.632        
cufflinks 6.566        
cufflinks 6.659        
cufflinks 1.865        
cufflinks 5.99        
cufflinks 2.086        
cufflinks 0.456       Low
cufflinks 2.828        
cufflinks 3.25        
cufflinks 0.437       Low
cufflinks 2.583        
cufflinks 15.371     High High
cufflinks 7.138        
cufflinks 7.7        
cufflinks 8.417        
cufflinks 0.297       Low
cufflinks 0.066       Low
cufflinks 5.195        
cufflinks 2.631        
cufflinks 1.726        
cufflinks 4.892        

0 Strain