Gene : Sobic.002G403200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24193//PTHR24193:SF83 - ANKYRIN REPEAT PROTEIN // ANKYRIN REPEAT-CONTAINING PROTEIN Genomic Order:  4135
Name:  ? Sobic.002G403200 Secondary Identifier:  ? PAC:37951897
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G403200 0.5kb upstream 0.5kb upstream 2716 true Chr02: 75351104-75353819 Sorghum bicolor
Sobic.002G403200 0.5kb upstream 0.5kb upstream 500 false Chr02: 75353320-75353819 Sorghum bicolor
Sobic.002G403200 0.5kb downstream 0.5kb downstream 2716 true Chr02: 75350604-75353319 Sorghum bicolor
Sobic.002G403200 0.5kb downstream 0.5kb downstream 500 false Chr02: 75350604-75351103 Sorghum bicolor
Sobic.002G403200 1.0kb upstream 1.0kb upstream 3216 true Chr02: 75351104-75354319 Sorghum bicolor
Sobic.002G403200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 75353320-75354319 Sorghum bicolor
Sobic.002G403200 1.0kb downstream 1.0kb downstream 3216 true Chr02: 75350104-75353319 Sorghum bicolor
Sobic.002G403200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 75350104-75351103 Sorghum bicolor
Sobic.002G403200 2.0kb upstream 2.0kb upstream 4216 true Chr02: 75351104-75355319 Sorghum bicolor
Sobic.002G403200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 75353320-75355319 Sorghum bicolor
Sobic.002G403200 2.0kb downstream 2.0kb downstream 4216 true Chr02: 75349104-75353319 Sorghum bicolor
Sobic.002G403200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 75349104-75351103 Sorghum bicolor
Sobic.002G403200 5.0kb upstream 5.0kb upstream 7216 true Chr02: 75351104-75358319 Sorghum bicolor
Sobic.002G403200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 75353320-75358319 Sorghum bicolor
Sobic.002G403200 5.0kb downstream 5.0kb downstream 7216 true Chr02: 75346104-75353319 Sorghum bicolor
Sobic.002G403200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 75346104-75351103 Sorghum bicolor
Sobic.002G403200 10.0kb upstream 10.0kb upstream 12216 true Chr02: 75351104-75363319 Sorghum bicolor
Sobic.002G403200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 75353320-75363319 Sorghum bicolor
Sobic.002G403200 10.0kb downstream 10.0kb downstream 12216 true Chr02: 75341104-75353319 Sorghum bicolor
Sobic.002G403200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 75341104-75351103 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198887 5267 Panicoideae View MSA
124580277 5269 Grass View MSA
122045417 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346975 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.409     High High
cufflinks 1.303       Low
cufflinks 8.099        
cufflinks 17.689     High High
cufflinks 10.987        
cufflinks 17.408     High High
cufflinks 6.864        
cufflinks 1.886       Low
cufflinks 7.242        
cufflinks 8.008        
cufflinks 6.974        
cufflinks 5.168        
cufflinks 4.592        
cufflinks 5.997        
cufflinks 9.43        
cufflinks 6.531        
cufflinks 7.371        
cufflinks 8.236        
cufflinks 3.615        
cufflinks 7.768        
cufflinks 17.526     High High
cufflinks 11.276        
cufflinks 6.876        
cufflinks 7.267        
cufflinks 3.043       Low
cufflinks 1.033       Low
cufflinks 7.218        
cufflinks 117.888     High High
cufflinks 7.661        
cufflinks 15.155     High  

0 Strain