Gene : Sobic.002G399900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13377//PTHR13377:SF4 - PLACENTAL PROTEIN 6 // SUBFAMILY NOT NAMED Genomic Order:  4100
Name:  ? Sobic.002G399900 Secondary Identifier:  ? PAC:37952252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G399900 0.5kb upstream 0.5kb upstream 4303 true Chr02: 75080418-75084720 Sorghum bicolor
Sobic.002G399900 0.5kb upstream 0.5kb upstream 500 false Chr02: 75084221-75084720 Sorghum bicolor
Sobic.002G399900 0.5kb downstream 0.5kb downstream 4303 true Chr02: 75079918-75084220 Sorghum bicolor
Sobic.002G399900 0.5kb downstream 0.5kb downstream 500 false Chr02: 75079918-75080417 Sorghum bicolor
Sobic.002G399900 1.0kb upstream 1.0kb upstream 4803 true Chr02: 75080418-75085220 Sorghum bicolor
Sobic.002G399900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 75084221-75085220 Sorghum bicolor
Sobic.002G399900 1.0kb downstream 1.0kb downstream 4803 true Chr02: 75079418-75084220 Sorghum bicolor
Sobic.002G399900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 75079418-75080417 Sorghum bicolor
Sobic.002G399900 2.0kb upstream 2.0kb upstream 5803 true Chr02: 75080418-75086220 Sorghum bicolor
Sobic.002G399900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 75084221-75086220 Sorghum bicolor
Sobic.002G399900 2.0kb downstream 2.0kb downstream 5803 true Chr02: 75078418-75084220 Sorghum bicolor
Sobic.002G399900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 75078418-75080417 Sorghum bicolor
Sobic.002G399900 5.0kb upstream 5.0kb upstream 8803 true Chr02: 75080418-75089220 Sorghum bicolor
Sobic.002G399900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 75084221-75089220 Sorghum bicolor
Sobic.002G399900 5.0kb downstream 5.0kb downstream 8803 true Chr02: 75075418-75084220 Sorghum bicolor
Sobic.002G399900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 75075418-75080417 Sorghum bicolor
Sobic.002G399900 10.0kb upstream 10.0kb upstream 13803 true Chr02: 75080418-75094220 Sorghum bicolor
Sobic.002G399900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 75084221-75094220 Sorghum bicolor
Sobic.002G399900 10.0kb downstream 10.0kb downstream 13803 true Chr02: 75070418-75084220 Sorghum bicolor
Sobic.002G399900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 75070418-75080417 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175648 5267 Panicoideae View MSA
124574534 5269 Grass View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.743     High  
cufflinks 1.621       Low
cufflinks 5.274       Low
cufflinks 9.188        
cufflinks 19.959     High  
cufflinks 10.252        
cufflinks 14.315     High  
cufflinks 4.768       Low
cufflinks 14.71     High  
cufflinks 13.592     High  
cufflinks 15.492     High  
cufflinks 14.87     High  
cufflinks 15.66     High  
cufflinks 16.47     High  
cufflinks 12.628     High  
cufflinks 3.832       Low
cufflinks 15.399     High  
cufflinks 15.662     High  
cufflinks 4.006       Low
cufflinks 18.121     High  
cufflinks 24.787     High High
cufflinks 21.389     High  
cufflinks 17.621     High  
cufflinks 18.976     High  
cufflinks 3.214       Low
cufflinks 1.648       Low
cufflinks 11.358     High  
cufflinks 7.248        
cufflinks 14.077     High  
cufflinks 16.407     High  

0 Strain