Gene : Sobic.002G395500 S. bicolor v3.1.1
Defline:  (1 of 1) K07556 - ATP synthase mitochondrial F1 complex assembly factor 2 (ATPeAF2, ATPAF2, ATP12) Genomic Order:  4055
Name:  ? Sobic.002G395500 Secondary Identifier:  ? PAC:37950020
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G395500 0.5kb upstream 0.5kb upstream 2833 true Chr02: 74771553-74774385 Sorghum bicolor
Sobic.002G395500 0.5kb upstream 0.5kb upstream 500 false Chr02: 74773886-74774385 Sorghum bicolor
Sobic.002G395500 0.5kb downstream 0.5kb downstream 2833 true Chr02: 74771053-74773885 Sorghum bicolor
Sobic.002G395500 0.5kb downstream 0.5kb downstream 500 false Chr02: 74771053-74771552 Sorghum bicolor
Sobic.002G395500 1.0kb upstream 1.0kb upstream 3333 true Chr02: 74771553-74774885 Sorghum bicolor
Sobic.002G395500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 74773886-74774885 Sorghum bicolor
Sobic.002G395500 1.0kb downstream 1.0kb downstream 3333 true Chr02: 74770553-74773885 Sorghum bicolor
Sobic.002G395500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 74770553-74771552 Sorghum bicolor
Sobic.002G395500 2.0kb upstream 2.0kb upstream 4333 true Chr02: 74771553-74775885 Sorghum bicolor
Sobic.002G395500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 74773886-74775885 Sorghum bicolor
Sobic.002G395500 2.0kb downstream 2.0kb downstream 4333 true Chr02: 74769553-74773885 Sorghum bicolor
Sobic.002G395500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 74769553-74771552 Sorghum bicolor
Sobic.002G395500 5.0kb upstream 5.0kb upstream 7333 true Chr02: 74771553-74778885 Sorghum bicolor
Sobic.002G395500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 74773886-74778885 Sorghum bicolor
Sobic.002G395500 5.0kb downstream 5.0kb downstream 7333 true Chr02: 74766553-74773885 Sorghum bicolor
Sobic.002G395500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 74766553-74771552 Sorghum bicolor
Sobic.002G395500 10.0kb upstream 10.0kb upstream 12333 true Chr02: 74771553-74783885 Sorghum bicolor
Sobic.002G395500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 74773886-74783885 Sorghum bicolor
Sobic.002G395500 10.0kb downstream 10.0kb downstream 12333 true Chr02: 74761553-74773885 Sorghum bicolor
Sobic.002G395500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 74761553-74771552 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197382 5267 Panicoideae View MSA
124579051 5269 Grass View MSA
122045593 5273 Angiosperm View MSA
121344547 5274 Embryophyte View MSA
123428622 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.924     High High
cufflinks 3.14       Low
cufflinks 8.649        
cufflinks 15.238     High  
cufflinks 9.556        
cufflinks 19.538     High High
cufflinks 6.453        
cufflinks 3.169       Low
cufflinks 14.378     High  
cufflinks 12.537     High  
cufflinks 10.313        
cufflinks 8.538        
cufflinks 8.093        
cufflinks 10.849        
cufflinks 12.788     High  
cufflinks 7.169        
cufflinks 7.745        
cufflinks 7.622        
cufflinks 5.04       Low
cufflinks 8.75        
cufflinks 11.041        
cufflinks 14.453     High  
cufflinks 11.686     High  
cufflinks 11.304     High  
cufflinks 3.301       Low
cufflinks 3.069       Low
cufflinks 9.787        
cufflinks 27.094     High High
cufflinks 4.581       Low
cufflinks 12.607     High  

0 Strain