Gene : Sobic.002G380600 S. bicolor v3.1.1
Defline:  (1 of 1) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) Genomic Order:  3898
Name:  ? Sobic.002G380600 Secondary Identifier:  ? PAC:37952398
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G380600 0.5kb upstream 0.5kb upstream 3966 true Chr02: 73657480-73661445 Sorghum bicolor
Sobic.002G380600 0.5kb upstream 0.5kb upstream 500 false Chr02: 73660946-73661445 Sorghum bicolor
Sobic.002G380600 0.5kb downstream 0.5kb downstream 3966 true Chr02: 73656980-73660945 Sorghum bicolor
Sobic.002G380600 0.5kb downstream 0.5kb downstream 500 false Chr02: 73656980-73657479 Sorghum bicolor
Sobic.002G380600 1.0kb upstream 1.0kb upstream 4466 true Chr02: 73657480-73661945 Sorghum bicolor
Sobic.002G380600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 73660946-73661945 Sorghum bicolor
Sobic.002G380600 1.0kb downstream 1.0kb downstream 4466 true Chr02: 73656480-73660945 Sorghum bicolor
Sobic.002G380600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 73656480-73657479 Sorghum bicolor
Sobic.002G380600 2.0kb upstream 2.0kb upstream 5466 true Chr02: 73657480-73662945 Sorghum bicolor
Sobic.002G380600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 73660946-73662945 Sorghum bicolor
Sobic.002G380600 2.0kb downstream 2.0kb downstream 5466 true Chr02: 73655480-73660945 Sorghum bicolor
Sobic.002G380600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 73655480-73657479 Sorghum bicolor
Sobic.002G380600 5.0kb upstream 5.0kb upstream 8466 true Chr02: 73657480-73665945 Sorghum bicolor
Sobic.002G380600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 73660946-73665945 Sorghum bicolor
Sobic.002G380600 5.0kb downstream 5.0kb downstream 8466 true Chr02: 73652480-73660945 Sorghum bicolor
Sobic.002G380600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 73652480-73657479 Sorghum bicolor
Sobic.002G380600 10.0kb upstream 10.0kb upstream 13466 true Chr02: 73657480-73670945 Sorghum bicolor
Sobic.002G380600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 73660946-73670945 Sorghum bicolor
Sobic.002G380600 10.0kb downstream 10.0kb downstream 13466 true Chr02: 73647480-73660945 Sorghum bicolor
Sobic.002G380600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 73647480-73657479 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177330 5267 Panicoideae View MSA
124585745 5269 Grass View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.342     High High
cufflinks 2.907       Low
cufflinks 4.483        
cufflinks 9.692        
cufflinks 7.79        
cufflinks 11.16       High
cufflinks 6.415        
cufflinks 3.031       Low
cufflinks 7.509        
cufflinks 7.937        
cufflinks 5.297        
cufflinks 4.852        
cufflinks 6.413        
cufflinks 5.531        
cufflinks 8.078        
cufflinks 3.638       Low
cufflinks 5.982        
cufflinks 5.866        
cufflinks 3.459       Low
cufflinks 5.902        
cufflinks 13.221       High
cufflinks 7.527        
cufflinks 5.089        
cufflinks 4.863        
cufflinks 4.146        
cufflinks 2.277       Low
cufflinks 5.88        
cufflinks 20.394     High High
cufflinks 4.912        
cufflinks 10.483       High

0 Strain