Gene : Sobic.002G359600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21314:SF0 - UPF0553 PROTEIN C9ORF64 Genomic Order:  3680
Name:  ? Sobic.002G359600 Secondary Identifier:  ? PAC:37950255
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G359600 0.5kb upstream 0.5kb upstream 8438 true Chr02: 72179689-72188126 Sorghum bicolor
Sobic.002G359600 0.5kb upstream 0.5kb upstream 500 false Chr02: 72179689-72180188 Sorghum bicolor
Sobic.002G359600 0.5kb downstream 0.5kb downstream 8438 true Chr02: 72180189-72188626 Sorghum bicolor
Sobic.002G359600 0.5kb downstream 0.5kb downstream 500 false Chr02: 72188127-72188626 Sorghum bicolor
Sobic.002G359600 1.0kb upstream 1.0kb upstream 8938 true Chr02: 72179189-72188126 Sorghum bicolor
Sobic.002G359600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72179189-72180188 Sorghum bicolor
Sobic.002G359600 1.0kb downstream 1.0kb downstream 8938 true Chr02: 72180189-72189126 Sorghum bicolor
Sobic.002G359600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72188127-72189126 Sorghum bicolor
Sobic.002G359600 2.0kb upstream 2.0kb upstream 9938 true Chr02: 72178189-72188126 Sorghum bicolor
Sobic.002G359600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72178189-72180188 Sorghum bicolor
Sobic.002G359600 2.0kb downstream 2.0kb downstream 9938 true Chr02: 72180189-72190126 Sorghum bicolor
Sobic.002G359600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72188127-72190126 Sorghum bicolor
Sobic.002G359600 5.0kb upstream 5.0kb upstream 12938 true Chr02: 72175189-72188126 Sorghum bicolor
Sobic.002G359600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72175189-72180188 Sorghum bicolor
Sobic.002G359600 5.0kb downstream 5.0kb downstream 12938 true Chr02: 72180189-72193126 Sorghum bicolor
Sobic.002G359600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72188127-72193126 Sorghum bicolor
Sobic.002G359600 10.0kb upstream 10.0kb upstream 17938 true Chr02: 72170189-72188126 Sorghum bicolor
Sobic.002G359600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72170189-72180188 Sorghum bicolor
Sobic.002G359600 10.0kb downstream 10.0kb downstream 17938 true Chr02: 72180189-72198126 Sorghum bicolor
Sobic.002G359600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72188127-72198126 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175834 5267 Panicoideae View MSA
124582702 5269 Grass View MSA
122048860 5273 Angiosperm View MSA
121348381 5274 Embryophyte View MSA
123425708 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.903        
cufflinks 4.778       High
cufflinks 4.18       High
cufflinks 3.111        
cufflinks 0.929        
cufflinks 3.992        
cufflinks 3.261        
cufflinks 4.098       High
cufflinks 0.4       Low
cufflinks 0.221       Low
cufflinks 0.591        
cufflinks 0.438       Low
cufflinks 0.903        
cufflinks 0.437       Low
cufflinks 1.074        
cufflinks 4.16       High
cufflinks 3.086        
cufflinks 4.018       High
cufflinks 4.162       High
cufflinks 2.939        
cufflinks 2.099        
cufflinks 0.464        
cufflinks 0.418       Low
cufflinks 0.593        
cufflinks 4.816       High
cufflinks 3.6        
cufflinks 0.591        
cufflinks 0.045     Low Low
cufflinks 9.581       High
cufflinks 1.206        

0 Strain