Gene : Sobic.006G160300 S. bicolor v3.1.1
Defline:  similar to OSIGBa0159I10.11 protein Genomic Order:  1675
Name:  ? Sobic.006G160300 Secondary Identifier:  ? PAC:37946175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G160300 0.5kb upstream 0.5kb upstream 3232 true Chr06: 51833705-51836936 Sorghum bicolor
Sobic.006G160300 0.5kb upstream 0.5kb upstream 500 false Chr06: 51836437-51836936 Sorghum bicolor
Sobic.006G160300 0.5kb downstream 0.5kb downstream 3232 true Chr06: 51833205-51836436 Sorghum bicolor
Sobic.006G160300 0.5kb downstream 0.5kb downstream 500 false Chr06: 51833205-51833704 Sorghum bicolor
Sobic.006G160300 1.0kb upstream 1.0kb upstream 3732 true Chr06: 51833705-51837436 Sorghum bicolor
Sobic.006G160300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51836437-51837436 Sorghum bicolor
Sobic.006G160300 1.0kb downstream 1.0kb downstream 3732 true Chr06: 51832705-51836436 Sorghum bicolor
Sobic.006G160300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51832705-51833704 Sorghum bicolor
Sobic.006G160300 2.0kb upstream 2.0kb upstream 4732 true Chr06: 51833705-51838436 Sorghum bicolor
Sobic.006G160300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51836437-51838436 Sorghum bicolor
Sobic.006G160300 2.0kb downstream 2.0kb downstream 4732 true Chr06: 51831705-51836436 Sorghum bicolor
Sobic.006G160300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51831705-51833704 Sorghum bicolor
Sobic.006G160300 5.0kb upstream 5.0kb upstream 7732 true Chr06: 51833705-51841436 Sorghum bicolor
Sobic.006G160300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51836437-51841436 Sorghum bicolor
Sobic.006G160300 5.0kb downstream 5.0kb downstream 7732 true Chr06: 51828705-51836436 Sorghum bicolor
Sobic.006G160300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51828705-51833704 Sorghum bicolor
Sobic.006G160300 10.0kb upstream 10.0kb upstream 12732 true Chr06: 51833705-51846436 Sorghum bicolor
Sobic.006G160300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51836437-51846436 Sorghum bicolor
Sobic.006G160300 10.0kb downstream 10.0kb downstream 12732 true Chr06: 51823705-51836436 Sorghum bicolor
Sobic.006G160300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51823705-51833704 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182818 5267 Panicoideae View MSA
124582960 5269 Grass View MSA
122048790 5273 Angiosperm View MSA
121349431 5274 Embryophyte View MSA
123381305 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.214       High
cufflinks 1.329       Low
cufflinks 2.769        
cufflinks 4.935       High
cufflinks 1.13       Low
cufflinks 2.93        
cufflinks 1.801        
cufflinks 1.668        
cufflinks 4.353       High
cufflinks 4.226       High
cufflinks 1.464        
cufflinks 3.104        
cufflinks 2.767        
cufflinks 2.189        
cufflinks 3.246       High
cufflinks 3.203       High
cufflinks 2.076        
cufflinks 1.621        
cufflinks 1.875        
cufflinks 4.613       High
cufflinks 2.051        
cufflinks 1.724        
cufflinks 2.127        
cufflinks 2.122        
cufflinks 2.157        
cufflinks 1.462        
cufflinks 1.697        
cufflinks 2.437        
cufflinks 1.314       Low
cufflinks 2.744        

0 Strain