Gene : Sobic.006G261100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23322//PTHR23322:SF6 - FAS-ASSOCIATED PROTEIN // UBX DOMAIN-CONTAINING PROTEIN 7 Genomic Order:  2728
Name:  ? Sobic.006G261100 Secondary Identifier:  ? PAC:37948879
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G261100 0.5kb upstream 0.5kb upstream 5757 true Chr06: 59592619-59598375 Sorghum bicolor
Sobic.006G261100 0.5kb upstream 0.5kb upstream 500 false Chr06: 59592619-59593118 Sorghum bicolor
Sobic.006G261100 0.5kb downstream 0.5kb downstream 5757 true Chr06: 59593119-59598875 Sorghum bicolor
Sobic.006G261100 0.5kb downstream 0.5kb downstream 500 false Chr06: 59598376-59598875 Sorghum bicolor
Sobic.006G261100 1.0kb upstream 1.0kb upstream 6257 true Chr06: 59592119-59598375 Sorghum bicolor
Sobic.006G261100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 59592119-59593118 Sorghum bicolor
Sobic.006G261100 1.0kb downstream 1.0kb downstream 6257 true Chr06: 59593119-59599375 Sorghum bicolor
Sobic.006G261100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 59598376-59599375 Sorghum bicolor
Sobic.006G261100 2.0kb upstream 2.0kb upstream 7257 true Chr06: 59591119-59598375 Sorghum bicolor
Sobic.006G261100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 59591119-59593118 Sorghum bicolor
Sobic.006G261100 2.0kb downstream 2.0kb downstream 7257 true Chr06: 59593119-59600375 Sorghum bicolor
Sobic.006G261100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 59598376-59600375 Sorghum bicolor
Sobic.006G261100 5.0kb upstream 5.0kb upstream 10257 true Chr06: 59588119-59598375 Sorghum bicolor
Sobic.006G261100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 59588119-59593118 Sorghum bicolor
Sobic.006G261100 5.0kb downstream 5.0kb downstream 10257 true Chr06: 59593119-59603375 Sorghum bicolor
Sobic.006G261100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 59598376-59603375 Sorghum bicolor
Sobic.006G261100 10.0kb upstream 10.0kb upstream 15257 true Chr06: 59583119-59598375 Sorghum bicolor
Sobic.006G261100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 59583119-59593118 Sorghum bicolor
Sobic.006G261100 10.0kb downstream 10.0kb downstream 15257 true Chr06: 59593119-59608375 Sorghum bicolor
Sobic.006G261100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 59598376-59608375 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186825 5267 Panicoideae View MSA
124576687 5269 Grass View MSA
122046461 5273 Angiosperm View MSA
121343946 5274 Embryophyte View MSA
123424965 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.682     High  
cufflinks 1.813       Low
cufflinks 4.508       Low
cufflinks 7.895        
cufflinks 12.848     High  
cufflinks 8.932        
cufflinks 9.933        
cufflinks 4.966       Low
cufflinks 15.357     High  
cufflinks 16.414     High  
cufflinks 15.462     High  
cufflinks 19.706     High  
cufflinks 15.172     High  
cufflinks 18.244     High  
cufflinks 10.687        
cufflinks 4.748       Low
cufflinks 10.303        
cufflinks 10.611        
cufflinks 4.893       Low
cufflinks 13.298     High  
cufflinks 22.966     High High
cufflinks 16.561     High  
cufflinks 17.627     High  
cufflinks 17.152     High  
cufflinks 3.75       Low
cufflinks 1.998       Low
cufflinks 13.26     High  
cufflinks 25.723     High High
cufflinks 11.875     High  
cufflinks 11.429        

0 Strain