Gene : Sobic.006G267700 S. bicolor v3.1.1
Defline:  (1 of 22) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  2796
Name:  ? Sobic.006G267700 Secondary Identifier:  ? PAC:37945829
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G267700 0.5kb upstream 0.5kb upstream 2869 true Chr06: 60088519-60091387 Sorghum bicolor
Sobic.006G267700 0.5kb upstream 0.5kb upstream 500 false Chr06: 60088519-60089018 Sorghum bicolor
Sobic.006G267700 0.5kb downstream 0.5kb downstream 2869 true Chr06: 60089019-60091887 Sorghum bicolor
Sobic.006G267700 0.5kb downstream 0.5kb downstream 500 false Chr06: 60091388-60091887 Sorghum bicolor
Sobic.006G267700 1.0kb upstream 1.0kb upstream 3369 true Chr06: 60088019-60091387 Sorghum bicolor
Sobic.006G267700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60088019-60089018 Sorghum bicolor
Sobic.006G267700 1.0kb downstream 1.0kb downstream 3369 true Chr06: 60089019-60092387 Sorghum bicolor
Sobic.006G267700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60091388-60092387 Sorghum bicolor
Sobic.006G267700 2.0kb upstream 2.0kb upstream 4369 true Chr06: 60087019-60091387 Sorghum bicolor
Sobic.006G267700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60087019-60089018 Sorghum bicolor
Sobic.006G267700 2.0kb downstream 2.0kb downstream 4369 true Chr06: 60089019-60093387 Sorghum bicolor
Sobic.006G267700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60091388-60093387 Sorghum bicolor
Sobic.006G267700 5.0kb upstream 5.0kb upstream 7369 true Chr06: 60084019-60091387 Sorghum bicolor
Sobic.006G267700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60084019-60089018 Sorghum bicolor
Sobic.006G267700 5.0kb downstream 5.0kb downstream 7369 true Chr06: 60089019-60096387 Sorghum bicolor
Sobic.006G267700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60091388-60096387 Sorghum bicolor
Sobic.006G267700 10.0kb upstream 10.0kb upstream 12369 true Chr06: 60079019-60091387 Sorghum bicolor
Sobic.006G267700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60079019-60089018 Sorghum bicolor
Sobic.006G267700 10.0kb downstream 10.0kb downstream 12369 true Chr06: 60089019-60101387 Sorghum bicolor
Sobic.006G267700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60091388-60101387 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026895 5273 Angiosperm View MSA
122184157 5267 Panicoideae View MSA
124577764 5269 Grass View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.905       Low
cufflinks 1.846       Low
cufflinks 2.89        
cufflinks 8.452        
cufflinks 2.23        
cufflinks 15.826     High High
cufflinks 3.536        
cufflinks 6.357        
cufflinks 12.889     High High
cufflinks 14.452     High High
cufflinks 6.698        
cufflinks 9.978        
cufflinks 20.416     High High
cufflinks 7.148        
cufflinks 9.712        
cufflinks 4.38        
cufflinks 3.607        
cufflinks 4.119        
cufflinks 6.431        
cufflinks 4.85        
cufflinks 0.271       Low
cufflinks 4.865        
cufflinks 4.891        
cufflinks 4.843        
cufflinks 2.847        
cufflinks 2.316        
cufflinks 5.62        
cufflinks 0.762       Low
cufflinks 5.935        
cufflinks 9.148        

0 Strain