Gene : Sobic.006G225300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR34126//PTHR34126:SF1 - FAMILY NOT NAMED // PEROXISOME BIOGENESIS PROTEIN 22 Genomic Order:  2353
Name:  ? Sobic.006G225300 Secondary Identifier:  ? PAC:37946803
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G225300 0.5kb upstream 0.5kb upstream 6254 true Chr06: 57082296-57088549 Sorghum bicolor
Sobic.006G225300 0.5kb upstream 0.5kb upstream 500 false Chr06: 57082296-57082795 Sorghum bicolor
Sobic.006G225300 0.5kb downstream 0.5kb downstream 6254 true Chr06: 57082796-57089049 Sorghum bicolor
Sobic.006G225300 0.5kb downstream 0.5kb downstream 500 false Chr06: 57088550-57089049 Sorghum bicolor
Sobic.006G225300 1.0kb upstream 1.0kb upstream 6754 true Chr06: 57081796-57088549 Sorghum bicolor
Sobic.006G225300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57081796-57082795 Sorghum bicolor
Sobic.006G225300 1.0kb downstream 1.0kb downstream 6754 true Chr06: 57082796-57089549 Sorghum bicolor
Sobic.006G225300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57088550-57089549 Sorghum bicolor
Sobic.006G225300 2.0kb upstream 2.0kb upstream 7754 true Chr06: 57080796-57088549 Sorghum bicolor
Sobic.006G225300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57080796-57082795 Sorghum bicolor
Sobic.006G225300 2.0kb downstream 2.0kb downstream 7754 true Chr06: 57082796-57090549 Sorghum bicolor
Sobic.006G225300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57088550-57090549 Sorghum bicolor
Sobic.006G225300 5.0kb upstream 5.0kb upstream 10754 true Chr06: 57077796-57088549 Sorghum bicolor
Sobic.006G225300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57077796-57082795 Sorghum bicolor
Sobic.006G225300 5.0kb downstream 5.0kb downstream 10754 true Chr06: 57082796-57093549 Sorghum bicolor
Sobic.006G225300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57088550-57093549 Sorghum bicolor
Sobic.006G225300 10.0kb upstream 10.0kb upstream 15754 true Chr06: 57072796-57088549 Sorghum bicolor
Sobic.006G225300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57072796-57082795 Sorghum bicolor
Sobic.006G225300 10.0kb downstream 10.0kb downstream 15754 true Chr06: 57082796-57098549 Sorghum bicolor
Sobic.006G225300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57088550-57098549 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175430 5267 Panicoideae View MSA
124577510 5269 Grass View MSA
122047341 5273 Angiosperm View MSA
121350809 5274 Embryophyte View MSA
123425554 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.978       High
cufflinks 6.01        
cufflinks 10.351     High High
cufflinks 9.576       High
cufflinks 6.664        
cufflinks 8.152        
cufflinks 6.674        
cufflinks 3.384       Low
cufflinks 7.11        
cufflinks 6.765        
cufflinks 5.895        
cufflinks 6.094        
cufflinks 7.108        
cufflinks 6.388        
cufflinks 7.996        
cufflinks 10.158     High High
cufflinks 7.388        
cufflinks 7.413        
cufflinks 4.974       Low
cufflinks 9.639       High
cufflinks 7.714        
cufflinks 6.858        
cufflinks 6.369        
cufflinks 5.897        
cufflinks 6.047        
cufflinks 3.887       Low
cufflinks 5.919        
cufflinks 11.991     High High
cufflinks 4.233       Low
cufflinks 7.012        

0 Strain