Gene : Sobic.006G270800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10827//PTHR10827:SF54 - RETICULOCALBIN // CALCIUM-BINDING EF HAND FAMILY PROTEIN Genomic Order:  2828
Name:  ? Sobic.006G270800 Secondary Identifier:  ? PAC:37949205
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G270800 0.5kb upstream 0.5kb upstream 2551 true Chr06: 60289866-60292416 Sorghum bicolor
Sobic.006G270800 0.5kb upstream 0.5kb upstream 500 false Chr06: 60289866-60290365 Sorghum bicolor
Sobic.006G270800 0.5kb downstream 0.5kb downstream 2551 true Chr06: 60290366-60292916 Sorghum bicolor
Sobic.006G270800 0.5kb downstream 0.5kb downstream 500 false Chr06: 60292417-60292916 Sorghum bicolor
Sobic.006G270800 1.0kb upstream 1.0kb upstream 3051 true Chr06: 60289366-60292416 Sorghum bicolor
Sobic.006G270800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60289366-60290365 Sorghum bicolor
Sobic.006G270800 1.0kb downstream 1.0kb downstream 3051 true Chr06: 60290366-60293416 Sorghum bicolor
Sobic.006G270800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60292417-60293416 Sorghum bicolor
Sobic.006G270800 2.0kb upstream 2.0kb upstream 4051 true Chr06: 60288366-60292416 Sorghum bicolor
Sobic.006G270800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60288366-60290365 Sorghum bicolor
Sobic.006G270800 2.0kb downstream 2.0kb downstream 4051 true Chr06: 60290366-60294416 Sorghum bicolor
Sobic.006G270800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60292417-60294416 Sorghum bicolor
Sobic.006G270800 5.0kb upstream 5.0kb upstream 7051 true Chr06: 60285366-60292416 Sorghum bicolor
Sobic.006G270800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60285366-60290365 Sorghum bicolor
Sobic.006G270800 5.0kb downstream 5.0kb downstream 7051 true Chr06: 60290366-60297416 Sorghum bicolor
Sobic.006G270800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60292417-60297416 Sorghum bicolor
Sobic.006G270800 10.0kb upstream 10.0kb upstream 12051 true Chr06: 60280366-60292416 Sorghum bicolor
Sobic.006G270800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60280366-60290365 Sorghum bicolor
Sobic.006G270800 10.0kb downstream 10.0kb downstream 12051 true Chr06: 60290366-60302416 Sorghum bicolor
Sobic.006G270800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60292417-60302416 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185723 5267 Panicoideae View MSA
124584658 5269 Grass View MSA
122049125 5273 Angiosperm View MSA
121311258 5274 Embryophyte View MSA
123348573 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.171        
cufflinks 0.015     Low  
cufflinks 44.162     High High
cufflinks 4.537       High
cufflinks 0.035     Low  
cufflinks 2.971       High
cufflinks 0.024     Low  
cufflinks 0.022     Low  
cufflinks 0.056     Low  
cufflinks 0.083        
cufflinks 0.005     Low Low
cufflinks 0.033     Low  
cufflinks 0.08        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 186.303     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.159        
cufflinks 0.011     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.092        
cufflinks 0.043     Low  
cufflinks 0.315        
cufflinks 0.008     Low  
cufflinks 125.897     High High

0 Strain