Gene : Sobic.006G271300 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR10774//PTHR10774:SF58 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2833
Name:  ? Sobic.006G271300 Secondary Identifier:  ? PAC:37947340
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G271300 0.5kb upstream 0.5kb upstream 2260 true Chr06: 60313512-60315771 Sorghum bicolor
Sobic.006G271300 0.5kb upstream 0.5kb upstream 500 false Chr06: 60313512-60314011 Sorghum bicolor
Sobic.006G271300 0.5kb downstream 0.5kb downstream 2260 true Chr06: 60314012-60316271 Sorghum bicolor
Sobic.006G271300 0.5kb downstream 0.5kb downstream 500 false Chr06: 60315772-60316271 Sorghum bicolor
Sobic.006G271300 1.0kb upstream 1.0kb upstream 2760 true Chr06: 60313012-60315771 Sorghum bicolor
Sobic.006G271300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60313012-60314011 Sorghum bicolor
Sobic.006G271300 1.0kb downstream 1.0kb downstream 2760 true Chr06: 60314012-60316771 Sorghum bicolor
Sobic.006G271300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60315772-60316771 Sorghum bicolor
Sobic.006G271300 2.0kb upstream 2.0kb upstream 3760 true Chr06: 60312012-60315771 Sorghum bicolor
Sobic.006G271300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60312012-60314011 Sorghum bicolor
Sobic.006G271300 2.0kb downstream 2.0kb downstream 3760 true Chr06: 60314012-60317771 Sorghum bicolor
Sobic.006G271300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60315772-60317771 Sorghum bicolor
Sobic.006G271300 5.0kb upstream 5.0kb upstream 6760 true Chr06: 60309012-60315771 Sorghum bicolor
Sobic.006G271300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60309012-60314011 Sorghum bicolor
Sobic.006G271300 5.0kb downstream 5.0kb downstream 6760 true Chr06: 60314012-60320771 Sorghum bicolor
Sobic.006G271300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60315772-60320771 Sorghum bicolor
Sobic.006G271300 10.0kb upstream 10.0kb upstream 11760 true Chr06: 60304012-60315771 Sorghum bicolor
Sobic.006G271300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60304012-60314011 Sorghum bicolor
Sobic.006G271300 10.0kb downstream 10.0kb downstream 11760 true Chr06: 60314012-60325771 Sorghum bicolor
Sobic.006G271300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60315772-60325771 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188559 5267 Panicoideae View MSA
124568421 5269 Grass View MSA
122043310 5273 Angiosperm View MSA
121351694 5274 Embryophyte View MSA
123426112 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 88.978     High High
cufflinks 2.04       Low
cufflinks 6.289       Low
cufflinks 12.61     High  
cufflinks 57.844     High  
cufflinks 10.562        
cufflinks 18.535     High  
cufflinks 5.498       Low
cufflinks 15.227     High  
cufflinks 21.92     High  
cufflinks 50.26     High  
cufflinks 51.969     High  
cufflinks 23.226     High  
cufflinks 72.646     High High
cufflinks 69.678     High High
cufflinks 6.261       Low
cufflinks 17.74     High  
cufflinks 17.635     High  
cufflinks 8.082        
cufflinks 29.376     High  
cufflinks 6.641       Low
cufflinks 95.117     High High
cufflinks 67.798     High  
cufflinks 73.075     High High
cufflinks 5.905       Low
cufflinks 1.614       Low
cufflinks 48.345     High  
cufflinks 8.132        
cufflinks 18.306     High  
cufflinks 42.534     High  

0 Strain